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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1625 and PfGW456L13_1626 are separated by 192 nucleotides
PfGW456L13_1626 and PfGW456L13_1627 are separated by 24 nucleotides
PfGW456L13_1627 and PfGW456L13_1628 are separated by 90 nucleotides
PfGW456L13_1628 and PfGW456L13_1629 are separated by 194 nucleotides
PfGW456L13_1625 - FIG00958649: hypothetical protein, at 1,787,658 to 1,788,044
_1625
PfGW456L13_1626 - Alpha/beta hydrolase, at 1,788,237 to 1,788,866
_1626
PfGW456L13_1627 - Tryptophanyl-tRNA synthetase (EC 6.1.1.2), at 1,788,891 to 1,790,246
_1627
PfGW456L13_1628 - ATPase, AFG1 family, at 1,790,337 to 1,791,431
_1628
PfGW456L13_1629 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 1,791,626 to 1,792,621
_1629
Group
Condition
PfGW456L13
_1625
PfGW456L13
_1626
PfGW456L13
_1627
PfGW456L13
_1628
PfGW456L13
_1629
carbon source
Trisodium citrate (C)
-4.2
+0.1
N.D.
-0.4
-0.4
carbon source
succinate (C)
+0.1
+0.1
N.D.
-4.1
-0.0
carbon source
a-Ketoglutaric (C)
-0.4
-0.4
N.D.
-2.9
-0.0
carbon source
D,L-Lactate (C)
-1.1
-0.6
N.D.
-1.6
-0.1
carbon source
D-Fructose (C)
-2.8
+0.1
N.D.
-0.1
-0.2
carbon source
a-Ketoglutaric (C)
-0.7
+0.2
N.D.
-2.4
+0.0
carbon source
L-Malic (C)
-0.1
+0.1
N.D.
-2.7
-0.1
carbon source
L-Glutamine (C)
-1.2
-0.0
N.D.
-1.4
-0.1
carbon source
L-Glutamine (C)
-1.0
-0.0
N.D.
-1.7
-0.0
nitrogen source
L-Valine (N)
-0.5
-0.5
N.D.
-1.5
-0.1
nitrogen source
Ammonium chloride (N)
-1.7
-0.3
N.D.
-0.5
-0.0
nitrogen source
L-Isoleucine (N)
-0.8
-0.0
N.D.
-1.5
-0.2
nitrogen source
L-Serine (N)
-1.3
-0.3
N.D.
-0.8
-0.0
carbon source
D-Fructose (C)
-1.3
+0.0
N.D.
-1.1
+0.0
nitrogen source
L-Aspartic Acid (N)
-1.1
+0.1
N.D.
-1.3
+0.1
nitrogen source
nitrate (N)
-0.6
-0.4
N.D.
-1.1
-0.2
carbon source
D-Serine (C)
-1.8
+0.4
N.D.
-0.8
+0.1
stress
Vancomycin 0.5 mg/ml
+0.4
-0.0
N.D.
-2.0
-0.1
carbon source
L-Histidine (C)
-1.6
-0.2
N.D.
+0.6
-0.3
carbon source
L-Tryptophan (C)
-1.3
+0.3
N.D.
+0.2
-0.6
stress
Thallium(I) acetate 0.004 mg/ml
-1.9
-0.1
N.D.
+0.6
-0.0
carbon source
Tween 20 (C)
+0.7
-0.0
N.D.
-1.9
-0.0
carbon source
L-Phenylalanine (C)
-1.5
-0.1
N.D.
+0.6
-0.2
nitrogen source
D-Serine (N)
+0.8
-0.5
N.D.
-1.5
+0.2
carbon source
L-Malic (C)
-1.5
+0.2
N.D.
+0.9
-0.0
carbon source
Putrescine (C)
-1.0
-0.1
N.D.
+1.2
-0.2
stress
nitrate 200 mM
-1.6
+0.4
N.D.
+1.7
+0.0
stress
Aluminum chloride 5 mM
-0.3
+0.3
N.D.
+1.8
+0.0
carbon source
L-Histidine (C)
-0.8
-0.0
N.D.
+2.8
-0.0
carbon source
octanoate (C)
-1.9
+0.8
N.D.
+3.0
+0.2
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