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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1623 and PfGW456L13_1624 are separated by 104 nucleotides
PfGW456L13_1624 and PfGW456L13_1625 are separated by 275 nucleotides
PfGW456L13_1625 and PfGW456L13_1626 are separated by 192 nucleotides
PfGW456L13_1626 and PfGW456L13_1627 are separated by 24 nucleotides
PfGW456L13_1623 - Hypothetical metal-binding enzyme, YcbL homolog, at 1,785,902 to 1,786,543
_1623
PfGW456L13_1624 - Outer membrane protein assembly factor YaeT precursor, at 1,786,648 to 1,787,382
_1624
PfGW456L13_1625 - FIG00958649: hypothetical protein, at 1,787,658 to 1,788,044
_1625
PfGW456L13_1626 - Alpha/beta hydrolase, at 1,788,237 to 1,788,866
_1626
PfGW456L13_1627 - Tryptophanyl-tRNA synthetase (EC 6.1.1.2), at 1,788,891 to 1,790,246
_1627
Group
Condition
PfGW456L13
_1623
PfGW456L13
_1624
PfGW456L13
_1625
PfGW456L13
_1626
PfGW456L13
_1627
carbon source
Trisodium citrate (C)
-0.1
-0.5
-4.2
+0.1
N.D.
carbon source
D,L-Lactate (C)
-0.4
-0.4
-1.1
-0.6
N.D.
carbon source
D-Fructose (C)
+0.1
+0.3
-2.8
+0.1
N.D.
carbon source
L-Histidine (C)
+0.1
-0.3
-1.6
-0.2
N.D.
stress
Thallium(I) acetate 0.004 mg/ml
+0.0
-0.1
-1.9
-0.1
N.D.
carbon source
D-Fructose (C)
-0.6
+0.1
-1.3
+0.0
N.D.
nitrogen source
L-Serine (N)
-0.2
+0.0
-1.3
-0.3
N.D.
nitrogen source
Ammonium chloride (N)
-0.0
+0.3
-1.7
-0.3
N.D.
carbon source
L-Phenylalanine (C)
+0.0
-0.2
-1.5
-0.1
N.D.
stress
nitrate 200 mM
-0.2
-0.3
-1.6
+0.4
N.D.
carbon source
Glycerol (C)
-0.0
+0.0
-1.5
-0.2
N.D.
stress
Zinc 1 mM
+0.0
-0.2
-1.5
+0.2
N.D.
carbon source
L-Phenylalanine (C)
+0.1
-0.1
-1.6
+0.0
N.D.
nitrogen source
Gly-DL-Asp (N)
-0.2
+0.1
-1.4
-0.1
N.D.
nitrogen source
NAG (N)
-0.2
+0.2
-1.1
-0.3
N.D.
stress
Thallium(I) acetate 0.008 mg/ml
-0.2
+0.1
-1.3
-0.1
N.D.
carbon source
D-Serine (C)
-0.0
+0.0
-1.8
+0.4
N.D.
carbon source
L-Arabinose (C)
+0.3
-0.7
-1.0
-0.0
N.D.
carbon source
L-Lactate (C)
-0.4
-0.1
-1.0
+0.2
N.D.
stress
A22 0.04 mg/ml
+0.1
-0.2
-1.5
+0.2
N.D.
stress
Nickel (II) chloride 1 mM
+0.2
-0.0
-1.4
+0.0
N.D.
carbon source
L-Malic (C)
+0.0
+0.1
-1.5
+0.2
N.D.
carbon source
octanoate (C)
-0.0
+0.0
-1.9
+0.8
N.D.
carbon source
D-Lactate (C)
+0.4
+0.0
-1.6
+0.0
N.D.
control
LB control
+0.1
+0.1
-1.3
-0.0
N.D.
carbon source
Putrescine (C)
+0.4
-0.3
-1.0
-0.1
N.D.
carbon source
L-Alanine (C)
-0.1
-0.1
-1.1
+0.4
N.D.
carbon source
D-Alanine (C)
+0.2
+0.1
-1.2
+0.1
N.D.
carbon source
L-Tryptophan (C)
+0.3
-0.1
-1.3
+0.3
N.D.
carbon source
a-Ketoglutaric (C)
+0.4
-0.3
-0.7
+0.2
N.D.
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