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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_1611 and PfGW456L13_1612 are separated by 35 nucleotides
PfGW456L13_1612 and PfGW456L13_1613 are separated by 111 nucleotides
PfGW456L13_1613 and PfGW456L13_1614 are separated by 251 nucleotides
PfGW456L13_1614 and PfGW456L13_1615 are separated by 170 nucleotides
PfGW456L13_1611 - FIG00954698: hypothetical protein, at 1,769,305 to 1,769,565
_1611
PfGW456L13_1612 - FIG00956396: hypothetical protein, at 1,769,601 to 1,770,224
_1612
PfGW456L13_1613 - Methyl-accepting chemotaxis protein, at 1,770,336 to 1,772,477
_1613
PfGW456L13_1614 - Zn-dependent protease with chaperone function, at 1,772,729 to 1,773,568
_1614
PfGW456L13_1615 - Probable transmembrane protein, at 1,773,739 to 1,774,323
_1615
Group
Condition
PfGW456L13
_1611
PfGW456L13
_1612
PfGW456L13
_1613
PfGW456L13
_1614
PfGW456L13
_1615
carbon source
D-Gluconic Acid (C)
-1.1
-3.3
-0.0
-0.1
-3.5
carbon source
a-Ketoglutaric (C)
-3.0
-1.4
+0.2
+0.1
-3.5
carbon source
succinate (C)
-2.5
+0.3
+0.2
-0.3
-4.8
carbon source
D-Fructose (C)
-0.9
-1.0
+0.1
+0.1
-4.3
carbon source
L-Glutamine (C)
-0.7
-1.2
+0.1
-0.1
-3.8
carbon source
L-Malic (C)
-1.4
+0.7
+0.2
-0.2
-4.9
carbon source
D,L-Lactate (C)
+0.4
-1.2
+0.2
-0.3
-4.7
carbon source
L-Phenylalanine (C)
-0.3
-1.0
+0.0
-0.0
-4.3
carbon source
Putrescine (C)
-0.7
-0.5
-0.0
-0.1
-4.0
carbon source
D-Galactose (C)
+0.1
-1.2
+0.0
+0.3
-4.4
carbon source
L-Asparagine (C)
-0.3
-0.7
+0.1
+0.0
-4.3
carbon source
L-Phenylalanine (C)
-0.1
-0.2
+0.1
-0.1
-4.8
carbon source
Trisodium citrate (C)
-0.4
-0.6
+0.0
+0.3
-4.4
nitrogen source
L-Glutamine (N)
+0.1
-1.0
+0.0
-0.1
-4.1
carbon source
D-Mannose (C)
-0.1
-0.2
+0.1
-0.2
-4.7
nitrogen source
L-Phenylalanine (N)
-0.3
+0.2
-0.0
+0.1
-4.7
carbon source
Glycerol (C)
-0.4
-0.6
+0.1
+0.1
-3.8
carbon source
D-Mannose (C)
+0.2
-0.6
+0.0
+0.1
-4.3
carbon source
L-Arabinose (C)
+0.3
-0.8
+0.1
-0.1
-4.1
carbon source
D-Lactate (C)
+0.4
+0.2
+0.2
-0.5
-4.8
nitrogen source
D-Serine (N)
+0.2
-0.6
-0.0
+0.1
-4.2
carbon source
L-Glutamine (C)
+0.9
-0.4
+0.2
-0.1
-4.9
nitrogen source
L-Asparagine (N)
+0.3
-0.5
+0.0
-0.1
-4.1
carbon source
L-Valine (C)
+0.4
+0.1
+0.2
-0.3
-4.8
carbon source
a-Ketoglutaric (C)
+0.8
-2.1
+0.5
-0.2
-3.1
nitrogen source
Putrescine (N)
-0.3
+0.4
+0.1
-0.0
-4.2
carbon source
D-Galactose (C)
+0.9
-0.3
+0.2
-0.3
-4.3
carbon source
L-Lactate (C)
+0.6
-0.2
+0.2
+0.0
-4.3
carbon source
D-Glucose (C)
+0.5
-0.2
+0.3
+0.5
-4.4
carbon source
octanoate (C)
+1.8
-0.3
+0.0
+0.0
-3.0
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