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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_1573 and PfGW456L13_1574 are separated by 170 nucleotides
PfGW456L13_1574 and PfGW456L13_1575 are separated by 22 nucleotides
PfGW456L13_1575 and PfGW456L13_1576 are separated by 169 nucleotides
PfGW456L13_1576 and PfGW456L13_1577 are separated by 142 nucleotides
PfGW456L13_1573 - fosmidomycin resistance protein, at 1,737,207 to 1,738,424
_1573
PfGW456L13_1574 - GTP-binding and nucleic acid-binding protein YchF, at 1,738,595 to 1,739,695
_1574
PfGW456L13_1575 - Peptidyl-tRNA hydrolase (EC 3.1.1.29), at 1,739,718 to 1,740,302
_1575
PfGW456L13_1576 - LSU ribosomal protein L25p, at 1,740,472 to 1,741,071
_1576
PfGW456L13_1577 - Ribose-phosphate pyrophosphokinase (EC 2.7.6.1), at 1,741,214 to 1,742,155
_1577
Group
Condition
PfGW456L13
_1573
PfGW456L13
_1574
PfGW456L13
_1575
PfGW456L13
_1576
PfGW456L13
_1577
carbon source
L-Tryptophan (C)
-0.3
-3.5
N.D.
N.D.
N.D.
carbon source
L-Lactate (C)
+0.0
-3.2
N.D.
N.D.
N.D.
carbon source
D-Mannose (C)
-0.1
-3.0
N.D.
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
+0.1
-2.8
N.D.
N.D.
N.D.
carbon source
Glycerol (C)
-0.1
-2.6
N.D.
N.D.
N.D.
carbon source
L-Malic (C)
+0.1
-2.8
N.D.
N.D.
N.D.
carbon source
D-Galactose (C)
+0.3
-2.7
N.D.
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
+0.3
-2.7
N.D.
N.D.
N.D.
carbon source
Glycerol (C)
+0.2
-2.6
N.D.
N.D.
N.D.
carbon source
L-Histidine (C)
+0.2
-2.5
N.D.
N.D.
N.D.
carbon source
D-Fructose (C)
+0.1
-2.3
N.D.
N.D.
N.D.
carbon source
L-Tryptophan (C)
-0.3
-1.8
N.D.
N.D.
N.D.
nitrogen source
L-Aspartic Acid (N)
+0.1
-2.3
N.D.
N.D.
N.D.
carbon source
succinate (C)
+0.0
-2.1
N.D.
N.D.
N.D.
nitrogen source
Ammonium chloride (N)
+0.1
-2.2
N.D.
N.D.
N.D.
nitrogen source
L-Glutamine (N)
+0.0
-2.1
N.D.
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
+0.3
-2.4
N.D.
N.D.
N.D.
carbon source
D-Alanine (C)
+0.2
-2.2
N.D.
N.D.
N.D.
stress
Vancomycin 0.125 mg/ml
-0.0
-1.8
N.D.
N.D.
N.D.
carbon source
D-Galactose (C)
-0.0
-1.8
N.D.
N.D.
N.D.
carbon source
L-Glutamine (C)
+0.3
-2.1
N.D.
N.D.
N.D.
nitrogen source
Putrescine (N)
+0.1
-1.9
N.D.
N.D.
N.D.
nitrogen source
L-Asparagine (N)
+0.2
-1.9
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
+0.1
-1.8
N.D.
N.D.
N.D.
carbon source
D,L-Lactate (C)
+0.2
-1.8
N.D.
N.D.
N.D.
nitrogen source
NAG (N)
+0.2
-1.8
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
+0.2
-1.8
N.D.
N.D.
N.D.
carbon source
casaminos (C)
+0.2
-1.7
N.D.
N.D.
N.D.
carbon source
D-Lactate (C)
+0.2
-1.6
N.D.
N.D.
N.D.
stress
Lomefloxacin 0.0004 mM
-0.0
+5.8
N.D.
N.D.
N.D.
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