Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_1559 and PfGW456L13_1560 are separated by 12 nucleotidesPfGW456L13_1560 and PfGW456L13_1561 are separated by 72 nucleotidesPfGW456L13_1561 and PfGW456L13_1562 are separated by 133 nucleotidesPfGW456L13_1562 and PfGW456L13_1563 are separated by 62 nucleotides PfGW456L13_1559 - NAD(P)H-flavin oxidoreductase, at 1,721,655 to 1,722,254 _1559 PfGW456L13_1560 - Mannose-6-phosphate isomerase (EC 5.3.1.8), at 1,722,267 to 1,722,638 _1560 PfGW456L13_1561 - Transcriptional regulator, AraC family, at 1,722,711 to 1,723,553 _1561 PfGW456L13_1562 - D-alanine--D-alanine ligase (EC 6.3.2.4), at 1,723,687 to 1,724,781 _1562 PfGW456L13_1563 - Gamma-glutamyltranspeptidase (EC 2.3.2.2), at 1,724,844 to 1,726,676 _1563
Group Condition PfGW456L13_1559 PfGW456L13_1560 PfGW456L13_1561 PfGW456L13_1562 PfGW456L13_1563
carbon source D-Fructose (C) -0.3 -0.0 -0.1 +0.5 -0.7
stress Aluminum chloride 5 mM -0.4 -0.0 -0.1 +0.1 -0.3
carbon source D-Glucose (C) -0.4 -0.1 -0.1 +0.4 -0.2
stress Vancomycin 0.125 mg/ml -0.2 -0.0 +0.3 -0.3 +0.0
carbon source L-Tryptophan (C) +0.0 +0.1 +0.2 -0.3 -0.2
carbon source D-Gluconic Acid (C) -0.2 +0.2 -0.1 -0.2 +0.1
carbon source D-Glucosamine Hydrochloride (C) -0.4 +0.1 +0.1 +0.3 -0.2
carbon source D-Gluconic Acid (C) -0.1 +0.4 -0.1 +0.2 -0.4
stress Lomefloxacin 0.0004 mM +0.0 -0.2 +0.2 -0.3 +0.3
carbon source a-Ketoglutaric (C) -0.5 +0.2 +0.2 -0.1 +0.2
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x -0.1 -0.2 -0.1 +0.3 +0.1
stress Paraquat dichloride 0.032 mg/ml +0.2 -0.2 +0.1 +0.2 -0.1
nitrogen source L-Asparagine (N) +0.3 -0.1 +0.2 -0.1 -0.1
stress Cephalothin 3 mg/ml +0.3 -0.0 -0.1 -0.2 +0.3
carbon source D-Galactose (C) -0.3 +0.1 +0.1 +0.2 +0.1
nitrogen source L-Valine (N) +0.4 +0.1 -0.1 -0.2 -0.1
carbon source L-Alanine (C) -0.1 +0.2 +0.3 +0.1 -0.2
carbon source octanoate (C) +0.6 -0.1 -0.2 +0.3 -0.2
carbon source D-Lactate (C) +0.1 +0.2 -0.2 +0.2 +0.1
carbon source succinate (C) -0.4 +0.1 +0.3 +0.1 +0.3
stress Vancomycin 0.5 mg/ml +0.5 +0.1 +0.1 -0.2 -0.0
carbon source L-Histidine (C) +0.2 +0.0 +0.2 +0.2 -0.1
carbon source Putrescine (C) +0.8 +0.1 +0.0 -0.0 -0.4
carbon source a-Ketoglutaric (C) +0.2 -0.1 +0.1 +0.4 -0.0
carbon source Glycerol (C) +0.3 -0.0 +0.3 +0.1 -0.0
carbon source L-Malic (C) +0.0 +0.4 +0.1 -0.0 +0.2
carbon source L-Arabinose (C) -0.0 -0.1 +0.3 +0.2 +0.3
nitrogen source Ammonium chloride (N) +0.6 +0.1 +0.1 +0.0 -0.0
carbon source D-Lactate (C) +0.3 +0.2 +0.2 +0.3 +0.1
carbon source L-Histidine (C) +0.3 +0.1 +0.3 +0.3 +0.1
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