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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1490 and PfGW456L13_1491 are separated by 101 nucleotides
PfGW456L13_1491 and PfGW456L13_1492 are separated by 239 nucleotides
PfGW456L13_1492 and PfGW456L13_1493 are separated by 193 nucleotides
PfGW456L13_1493 and PfGW456L13_1494 overlap by 4 nucleotides
PfGW456L13_1490 - hypothetical protein, at 1,640,658 to 1,640,900
_1490
PfGW456L13_1491 - FIG00953647: hypothetical protein, at 1,641,002 to 1,641,121
_1491
PfGW456L13_1492 - Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB), at 1,641,361 to 1,642,383
_1492
PfGW456L13_1493 - Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70), at 1,642,577 to 1,643,497
_1493
PfGW456L13_1494 - COG1496: Uncharacterized conserved protein, at 1,643,494 to 1,644,213
_1494
Group
Condition
PfGW456L13
_1490
PfGW456L13
_1491
PfGW456L13
_1492
PfGW456L13
_1493
PfGW456L13
_1494
carbon source
Trisodium citrate (C)
-0.5
-1.5
-3.3
N.D.
+0.1
carbon source
L-Glutamine (C)
-0.4
-0.2
-1.8
N.D.
-0.1
carbon source
octanoate (C)
-1.0
-0.8
+0.4
N.D.
-1.1
stress
Vancomycin 0.5 mg/ml
+0.3
-0.2
-2.2
N.D.
-0.3
carbon source
D-Fructose (C)
-0.3
-0.6
-1.3
N.D.
+0.0
carbon source
L-Glutamine (C)
-0.2
-0.7
-0.8
N.D.
-0.1
stress
Vancomycin 0.25 mg/ml
-0.2
-0.4
-1.1
N.D.
-0.1
stress
Lomefloxacin 0.0004 mM
-0.3
-0.3
-1.0
N.D.
-0.0
carbon source
D-Lactate (C)
-0.4
-0.2
-1.1
N.D.
+0.1
carbon source
D-Serine (C)
-0.2
-0.3
-1.0
N.D.
-0.0
stress
Aluminum chloride 5 mM
-0.3
-0.2
-1.2
N.D.
+0.1
carbon source
D-Gluconic Acid (C)
+0.0
-0.5
-0.8
N.D.
-0.2
stress
Fusidic 0.08 mg/ml
+0.2
-0.3
-1.1
N.D.
-0.2
stress
Aluminum chloride 2.5 mM
-0.1
-0.2
-0.9
N.D.
-0.0
carbon source
L-Malic (C)
-0.1
-0.2
-1.3
N.D.
+0.4
carbon source
D-Serine (C)
-0.5
-0.2
-0.8
N.D.
+0.4
carbon source
D-Gluconic Acid (C)
+0.4
-0.6
-1.2
N.D.
+0.3
carbon source
D-Glucose (C)
+0.1
-0.4
-0.8
N.D.
+0.0
stress
Vancomycin 0.125 mg/ml
+0.2
-0.3
-1.0
N.D.
+0.1
carbon source
D-Glucosamine Hydrochloride (C)
+0.1
-0.1
-1.1
N.D.
+0.3
carbon source
Putrescine (C)
+0.1
-0.4
-0.8
N.D.
+0.2
carbon source
D-Glucosamine Hydrochloride (C)
+0.0
+0.1
-1.1
N.D.
+0.2
carbon source
D-Lactate (C)
+0.3
-0.2
-0.9
N.D.
+0.3
carbon source
L-Tryptophan (C)
+0.1
+0.5
-1.0
N.D.
-0.0
carbon source
L-Histidine (C)
+0.4
-0.0
-1.0
N.D.
+0.1
carbon source
a-Ketoglutaric (C)
+0.1
+0.5
-0.8
N.D.
+0.1
carbon source
L-Lactate (C)
+0.1
+0.6
-0.7
N.D.
-0.1
carbon source
L-Arabinose (C)
+0.3
+0.3
-0.9
N.D.
+0.1
carbon source
Glycerol (C)
+0.5
+0.4
-1.0
N.D.
+0.3
carbon source
D-Mannose (C)
+0.0
+0.8
-0.5
N.D.
+0.1
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