Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_1485 and PfGW456L13_1486 are separated by 34 nucleotidesPfGW456L13_1486 and PfGW456L13_1487 are separated by 14 nucleotidesPfGW456L13_1487 and PfGW456L13_1488 are separated by 56 nucleotidesPfGW456L13_1488 and PfGW456L13_1489 are separated by 128 nucleotides PfGW456L13_1485 - Type IV fimbrial biogenesis protein PilX, at 1,636,758 to 1,637,222 _1485 PfGW456L13_1486 - hypothetical protein, at 1,637,257 to 1,637,622 _1486 PfGW456L13_1487 - Type IV pilus biogenesis protein PilE, at 1,637,637 to 1,638,038 _1487 PfGW456L13_1488 - Glycine oxidase ThiO (EC 1.4.3.19), at 1,638,095 to 1,639,195 _1488 PfGW456L13_1489 - Type IV fimbriae expression regulatory protein PilR, at 1,639,324 to 1,640,661 _1489
Group Condition PfGW456L13_1485 PfGW456L13_1486 PfGW456L13_1487 PfGW456L13_1488 PfGW456L13_1489
carbon source L-Lactate (C) -0.5 -0.8 -0.4 +0.1 -0.1
carbon source D-Glucose (C) -0.0 -1.5 -0.3 +0.1 +0.2
nitrogen source L-Serine (N) -0.1 -0.5 +0.1 -0.3 -0.1
carbon source L-Glutamine (C) -0.1 -0.7 +0.1 -0.1 +0.0
carbon source L-Valine (C) -0.4 -0.3 -0.1 -0.0 +0.0
nitrogen source L-Proline (N) +0.0 -0.3 -0.2 -0.2 +0.0
carbon source Putrescine (C) +0.3 -0.8 -0.2 +0.1 -0.0
carbon source Trisodium citrate (C) -0.3 -0.1 +0.2 -0.1 -0.2
carbon source L-Arabinose (C) -0.1 -0.6 +0.1 -0.1 +0.2
nitrogen source Ammonium chloride (N) -0.1 -0.6 +0.1 +0.0 -0.0
carbon source D-Galactose (C) -0.4 -0.3 +0.1 -0.0 +0.1
carbon source D-Lactate (C) -0.2 -0.3 -0.0 +0.3 -0.3
carbon source D-Serine (C) -0.0 -0.7 +0.2 -0.1 +0.0
stress Chloride 400 mM -0.1 -0.3 -0.1 +0.1 +0.1
carbon source D,L-Lactate (C) -0.1 -0.4 +0.3 +0.0 +0.1
carbon source D-Fructose (C) +0.0 +0.3 -0.0 -0.3 -0.1
stress Vancomycin 0.125 mg/ml +0.2 -0.4 +0.1 +0.1 -0.1
carbon source L-Alanine (C) -0.2 -0.2 +0.0 +0.2 +0.2
carbon source D-Glucosamine Hydrochloride (C) -0.1 -0.1 +0.2 -0.2 +0.1
nitrogen source L-Threonine (N) -0.2 -0.5 +0.7 +0.0 -0.1
carbon source octanoate (C) -0.0 -0.7 +1.1 +0.0 -0.3
carbon source D-Gluconic Acid (C) +0.4 -0.8 +0.2 +0.1 +0.2
nitrogen source Gly-Glu (N) -0.2 +0.3 +0.3 -0.2 -0.1
stress Nickel (II) chloride 1 mM +0.2 +0.4 -0.1 +0.1 +0.0
lb LB -0.1 +0.6 +0.1 +0.1 -0.0
carbon source Glycerol (C) -0.1 +0.5 +0.2 +0.0 +0.1
stress Vancomycin 0.5 mg/ml +0.4 +0.1 +0.3 -0.0 -0.0
stress Vancomycin 0.25 mg/ml +0.2 +0.2 +0.3 +0.1 -0.1
stress Bacitracin 1 mg/ml +0.3 +0.3 +0.2 +0.1 +0.0
carbon source a-Ketoglutaric (C) +0.2 +0.4 +0.3 +0.6 -0.1
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