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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1481 and PfGW456L13_1482 are separated by 130 nucleotides
PfGW456L13_1482 and PfGW456L13_1483 are separated by 29 nucleotides
PfGW456L13_1483 and PfGW456L13_1484 overlap by 4 nucleotides
PfGW456L13_1484 and PfGW456L13_1485 are separated by 25 nucleotides
PfGW456L13_1481 - Type IV fimbrial biogenesis protein FimT, at 1,634,439 to 1,634,978
_1481
PfGW456L13_1482 - type 4 fimbrial biogenesis protein FimU, at 1,635,109 to 1,635,582
_1482
PfGW456L13_1483 - Type IV fimbrial biogenesis protein PilV, at 1,635,612 to 1,636,028
_1483
PfGW456L13_1484 - Type IV fimbrial biogenesis protein PilW, at 1,636,025 to 1,636,732
_1484
PfGW456L13_1485 - Type IV fimbrial biogenesis protein PilX, at 1,636,758 to 1,637,222
_1485
Group
Condition
PfGW456L13
_1481
PfGW456L13
_1482
PfGW456L13
_1483
PfGW456L13
_1484
PfGW456L13
_1485
carbon source
octanoate (C)
+0.3
-0.4
-0.4
-0.6
-0.0
carbon source
L-Lactate (C)
-0.2
-0.3
+0.4
-0.3
-0.5
carbon source
D-Glucose (C)
-0.4
-0.3
+0.4
-0.2
-0.0
nitrogen source
L-Lysine (N)
-0.1
-0.4
+0.2
+0.0
-0.2
carbon source
D-Galactose (C)
+0.4
-0.3
+0.4
-0.4
-0.4
stress
Thallium(I) acetate 0.002 mg/ml
-0.1
-0.4
+0.0
-0.2
+0.2
carbon source
L-Valine (C)
+0.2
-0.2
+0.2
-0.1
-0.4
carbon source
Glycerol (C)
-0.2
-0.5
+0.2
+0.3
-0.1
carbon source
L-Histidine (C)
+0.3
-0.5
+0.1
-0.0
+0.0
nitrogen source
L-Citrulline (N)
-0.2
-0.2
+0.3
-0.2
+0.1
carbon source
D-Lactate (C)
+0.1
-0.5
+0.4
-0.1
+0.0
carbon source
L-Arabinose (C)
-0.3
-0.2
+0.2
-0.1
+0.2
carbon source
D,L-Lactate (C)
-0.1
+0.5
-0.1
-0.2
-0.1
carbon source
L-Arabinose (C)
-0.4
-0.0
+0.2
+0.2
-0.1
carbon source
Trisodium citrate (C)
+0.3
-0.3
+0.2
+0.2
-0.3
carbon source
L-Valine (C)
-0.3
+0.5
-0.1
+0.1
-0.1
stress
Fusidic 0.08 mg/ml
-0.3
+0.2
+0.3
+0.1
-0.1
carbon source
succinate (C)
+0.3
+0.4
-0.1
-0.3
+0.0
nitrogen source
D-Alanine (N)
-0.2
+0.3
+0.2
+0.2
-0.1
carbon source
D-Gluconic Acid (C)
-0.6
+0.6
-0.1
+0.2
+0.4
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.2
-0.1
+0.2
-0.1
+0.3
stress
Fusidic 0.03 mg/ml
+0.2
+0.3
+0.2
+0.1
-0.2
stress
Dimethyl Sulfoxide 7.5 vol%
-0.1
+0.5
-0.1
+0.0
+0.2
carbon source
a-Ketoglutaric (C)
+0.3
+0.3
-0.3
+0.3
+0.2
carbon source
a-Ketoglutaric (C)
-0.2
+0.4
+0.4
+0.2
-0.1
nitrogen source
L-Aspartic Acid (N)
+0.2
-0.1
+0.2
+0.3
+0.2
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.6
+0.4
+0.1
-0.2
+0.0
carbon source
D-Fructose (C)
+0.3
+0.3
-0.1
+0.4
+0.2
stress
Vancomycin 0.5 mg/ml
+0.2
+0.3
+0.2
+0.1
+0.4
nitrogen source
D-Serine (N)
+0.4
+0.3
+0.2
+0.3
+0.2
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