Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_1426 and PfGW456L13_1427 are separated by 36 nucleotidesPfGW456L13_1427 and PfGW456L13_1428 overlap by 4 nucleotidesPfGW456L13_1428 and PfGW456L13_1429 are separated by 140 nucleotidesPfGW456L13_1429 and PfGW456L13_1430 are separated by 113 nucleotides PfGW456L13_1426 - Transcriptional regulator, TetR family, at 1,575,705 to 1,576,382 _1426 PfGW456L13_1427 - Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25), at 1,576,419 to 1,577,282 _1427 PfGW456L13_1428 - 3-dehydroquinate dehydratase II (EC 4.2.1.10), at 1,577,279 to 1,577,719 _1428 PfGW456L13_1429 - Transcriptional regulator, LysR family, at 1,577,860 to 1,578,771 _1429 PfGW456L13_1430 - tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35), at 1,578,885 to 1,579,964 _1430
Group Condition PfGW456L13_1426 PfGW456L13_1427 PfGW456L13_1428 PfGW456L13_1429 PfGW456L13_1430
carbon source a-Ketoglutaric (C) -0.1 -0.0 -1.1 -0.4 -0.2
carbon source L-Lactate (C) -0.0 +0.2 -1.9 +0.1 -0.0
nitrogen source D-Serine (N) -0.3 -0.3 -0.4 +0.0 -0.3
carbon source D,L-Lactate (C) -0.2 +0.0 -0.9 +0.0 -0.2
carbon source L-Arabinose (C) -0.3 +0.5 -0.8 -0.4 -0.1
stress A22 0.04 mg/ml -0.1 +0.0 -0.7 -0.1 -0.1
nitrogen source nitrate (N) -0.1 -0.1 -0.7 -0.3 +0.1
nitrogen source Gly-Glu (N) -0.4 +0.0 -0.6 -0.0 +0.1
carbon source L-Tryptophan (C) -0.1 +0.3 -0.2 -0.1 -0.8
carbon source L-Histidine (C) -0.1 +0.1 -0.8 +0.1 -0.2
carbon source a-Ketoglutaric (C) -0.1 +0.1 -0.5 +0.1 -0.4
carbon source Putrescine (C) +0.0 +0.2 -0.2 +0.2 -0.7
carbon source Trisodium citrate (C) -0.1 -0.3 +0.6 +0.0 -0.7
carbon source D-Glucosamine Hydrochloride (C) -0.1 -0.6 -0.3 +0.4 +0.1
carbon source D-Lactate (C) -0.2 +0.1 -0.4 -0.2 +0.2
carbon source L-Malic (C) -0.1 -0.2 +0.4 -0.3 -0.2
carbon source L-Tryptophan (C) +0.1 +0.2 +0.4 +0.0 -0.8
carbon source L-Arabinose (C) -0.1 +0.0 +0.5 +0.0 -0.5
carbon source D-Galactose (C) -0.3 +0.2 -0.6 +0.3 +0.2
carbon source L-Histidine (C) +0.3 -0.3 +0.3 +0.3 -0.5
carbon source octanoate (C) +0.1 +0.2 +1.1 +0.1 -1.5
carbon source Glycerol (C) -0.2 +0.2 -0.2 +0.4 -0.1
carbon source L-Phenylalanine (C) +0.6 -0.0 -0.2 -0.1 -0.2
carbon source L-Phenylalanine (C) +0.7 -0.0 +0.3 -0.1 -0.4
stress nitrite 10 mM -0.3 +0.0 +1.0 +0.0 -0.1
nitrogen source Ammonium chloride (N) -0.0 +0.0 +0.6 +0.2 -0.2
carbon source D-Fructose (C) +0.1 +0.4 +0.0 +0.4 -0.2
carbon source D-Lactate (C) -0.2 +0.6 +0.2 +0.4 -0.2
carbon source D-Gluconic Acid (C) -0.0 +0.6 +0.6 +0.1 -0.4
stress Aluminum chloride 5 mM +0.3 -0.2 +0.9 +0.2 -0.1
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