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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1412 and PfGW456L13_1413 are separated by 106 nucleotides
PfGW456L13_1413 and PfGW456L13_1414 overlap by 4 nucleotides
PfGW456L13_1414 and PfGW456L13_1415 are separated by 143 nucleotides
PfGW456L13_1415 and PfGW456L13_1416 are separated by 0 nucleotides
PfGW456L13_1412 - acetyltransferase, GNAT family, at 1,560,773 to 1,561,342
_1412
PfGW456L13_1413 - Acyl-CoA thioesterase II (EC 3.1.2.-), at 1,561,449 to 1,562,318
_1413
PfGW456L13_1414 - Hydrolase in polyol utilization gene cluster, haloacid dehalogenase-like family, at 1,562,315 to 1,562,908
_1414
PfGW456L13_1415 - putative exported protein, at 1,563,052 to 1,564,011
_1415
PfGW456L13_1416 - YpfJ protein, zinc metalloprotease superfamily, at 1,564,012 to 1,564,905
_1416
Group
Condition
PfGW456L13
_1412
PfGW456L13
_1413
PfGW456L13
_1414
PfGW456L13
_1415
PfGW456L13
_1416
carbon source
Putrescine (C)
-1.4
+0.2
N.D.
-0.1
+0.3
carbon source
succinate (C)
-0.6
-0.0
N.D.
-0.1
-0.0
carbon source
D-Galactose (C)
-0.3
+0.1
N.D.
-0.4
-0.1
carbon source
L-Tryptophan (C)
-0.5
-0.1
N.D.
-0.1
+0.0
carbon source
D-Lactate (C)
-0.9
-0.3
N.D.
+0.4
+0.1
carbon source
L-Malic (C)
-0.3
-0.0
N.D.
-0.2
-0.2
nitrogen source
Gly-DL-Asp (N)
-0.6
+0.1
N.D.
-0.1
-0.0
carbon source
octanoate (C)
-0.5
-0.3
N.D.
-0.2
+0.4
stress
Cobalt chloride 0.16 mM
-0.6
+0.1
N.D.
-0.0
-0.0
carbon source
D-Lactate (C)
-0.3
-0.2
N.D.
-0.2
+0.1
carbon source
L-Malic (C)
-0.6
-0.1
N.D.
+0.1
+0.1
carbon source
D-Serine (C)
-0.4
+0.2
N.D.
-0.2
+0.1
carbon source
a-Ketoglutaric (C)
-0.6
+0.4
N.D.
+0.0
-0.1
carbon source
Trisodium citrate (C)
-0.4
+0.0
N.D.
+0.2
-0.1
carbon source
L-Alanine (C)
-0.3
+0.1
N.D.
-0.2
+0.2
stress
Aluminum chloride 2.5 mM
-0.3
+0.3
N.D.
-0.1
+0.0
carbon source
L-Phenylalanine (C)
-0.3
+0.4
N.D.
-0.1
-0.0
carbon source
D-Fructose (C)
-0.5
+0.2
N.D.
+0.1
+0.3
carbon source
Glycerol (C)
+0.4
-0.1
N.D.
-0.2
+0.2
carbon source
D,L-Lactate (C)
+0.4
-0.1
N.D.
+0.2
-0.0
nitrogen source
D-Serine (N)
+0.4
+0.3
N.D.
-0.0
-0.1
nitrogen source
Gly-Glu (N)
+0.3
+0.2
N.D.
-0.0
+0.2
carbon source
L-Arabinose (C)
+0.5
-0.2
N.D.
+0.0
+0.4
carbon source
L-Alanine (C)
+0.6
-0.1
N.D.
+0.1
+0.1
carbon source
Glycerol (C)
+0.6
+0.0
N.D.
+0.1
+0.0
carbon source
L-Valine (C)
+0.7
+0.1
N.D.
-0.2
+0.1
nitrogen source
D-Alanine (N)
+0.5
+0.2
N.D.
+0.2
-0.0
stress
Aluminum chloride 5 mM
+0.6
+0.1
N.D.
+0.1
+0.1
carbon source
D-Glucosamine Hydrochloride (C)
+0.8
+0.2
N.D.
+0.1
+0.0
carbon source
D-Gluconic Acid (C)
+0.8
+0.2
N.D.
+0.1
+0.3
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