Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_1345 and PfGW456L13_1346 overlap by 8 nucleotidesPfGW456L13_1346 and PfGW456L13_1347 are separated by 170 nucleotidesPfGW456L13_1347 and PfGW456L13_1348 are separated by 27 nucleotidesPfGW456L13_1348 and PfGW456L13_1349 are separated by 115 nucleotides PfGW456L13_1345 - 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-), at 1,491,111 to 1,491,743 _1345 PfGW456L13_1346 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 1,491,736 to 1,492,020 _1346 PfGW456L13_1347 - Nucleoside-diphosphate-sugar epimerases, at 1,492,191 to 1,492,832 _1347 PfGW456L13_1348 - MORN repeat family protein, at 1,492,860 to 1,494,578 _1348 PfGW456L13_1349 - MaoC-like domain protein, at 1,494,694 to 1,495,149 _1349
Group Condition PfGW456L13_1345 PfGW456L13_1346 PfGW456L13_1347 PfGW456L13_1348 PfGW456L13_1349
stress Lomefloxacin 0.0004 mM N.D. -0.6 -0.1 -1.0 -0.4
carbon source octanoate (C) N.D. -0.8 -0.1 -0.9 -0.0
carbon source D-Galactose (C) N.D. -0.3 -0.5 -0.1 -0.8
carbon source succinate (C) N.D. -0.0 -0.4 -0.1 -1.0
carbon source a-Ketoglutaric (C) N.D. -0.5 +0.2 -0.0 -1.0
stress Thallium(I) acetate 0.004 mg/ml N.D. -0.3 +0.1 +0.1 -0.8
carbon source D-Lactate (C) N.D. +0.2 +0.2 +0.0 -1.3
stress Thallium(I) acetate 0.008 mg/ml N.D. -0.4 +0.1 -0.1 -0.5
carbon source L-Arabinose (C) N.D. -0.7 -0.1 -0.1 +0.2
stress Dimethyl Sulfoxide 7.5 vol% N.D. -0.1 -0.1 +0.2 -0.6
carbon source D,L-Lactate (C) N.D. +0.4 +0.2 -0.2 -1.1
carbon source L-Malic (C) N.D. +0.4 +0.3 +0.0 -1.2
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x N.D. -0.3 +0.5 -0.0 -0.6
carbon source Putrescine (C) N.D. -0.6 +0.0 -0.0 +0.4
carbon source D-Fructose (C) N.D. -0.7 +0.4 +0.1 +0.1
carbon source L-Tryptophan (C) N.D. -0.2 -0.5 -0.0 +0.5
nitrogen source L-Histidine (N) N.D. +0.0 -0.3 -0.2 +0.6
nitrogen source L-Isoleucine (N) N.D. -0.2 -0.1 -0.1 +0.8
carbon source L-Histidine (C) N.D. -0.4 +0.3 +0.0 +0.4
stress Bacitracin 1 mg/ml N.D. -0.2 +0.0 +0.3 +0.4
carbon source D-Fructose (C) N.D. -0.2 -0.1 +0.0 +0.9
nitrogen source L-Glutamine (N) N.D. +0.2 -0.1 +0.1 +0.6
nitrogen source L-Threonine (N) N.D. +0.1 +0.1 -0.2 +1.1
nitrogen source Putrescine (N) N.D. +0.2 +0.2 +0.0 +0.7
nitrogen source D-Serine (N) N.D. +0.4 +0.1 +0.0 +0.7
nitrogen source Ammonium chloride (N) N.D. +0.2 +0.4 -0.0 +0.6
nitrogen source Gly-Glu (N) N.D. +0.1 +0.1 +0.0 +1.0
carbon source D-Serine (C) N.D. +0.4 +0.0 +0.0 +0.9
carbon source Trisodium citrate (C) N.D. +0.7 +0.3 -0.1 +0.6
stress Vancomycin 0.5 mg/ml N.D. +0.3 +0.1 +1.1 +0.2
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