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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1293 and PfGW456L13_1294 are separated by 70 nucleotides
PfGW456L13_1294 and PfGW456L13_1295 overlap by 4 nucleotides
PfGW456L13_1295 and PfGW456L13_1296 overlap by 4 nucleotides
PfGW456L13_1296 and PfGW456L13_1297 are separated by 203 nucleotides
PfGW456L13_1293 - Inner membrane protein YbhQ, at 1,431,503 to 1,432,405
_1293
PfGW456L13_1294 - Cardiolipin synthetase (EC 2.7.8.-), at 1,432,476 to 1,433,768
_1294
PfGW456L13_1295 - Endonuclease/Exonuclease/phosphatase family protein, at 1,433,765 to 1,434,562
_1295
PfGW456L13_1296 - FIG003003: hypothetical protein, at 1,434,559 to 1,435,161
_1296
PfGW456L13_1297 - Putative drug efflux protein, at 1,435,365 to 1,436,576
_1297
Group
Condition
PfGW456L13
_1293
PfGW456L13
_1294
PfGW456L13
_1295
PfGW456L13
_1296
PfGW456L13
_1297
nitrogen source
L-Threonine (N)
-0.0
+0.0
-0.2
-0.3
-0.2
carbon source
D-Fructose (C)
-0.2
+0.2
-0.0
-0.2
-0.4
nitrogen source
Gly-Glu (N)
+0.0
-0.1
-0.0
-0.2
-0.3
carbon source
Trisodium citrate (C)
-0.1
-0.1
-0.0
+0.2
-0.4
control
LB control
-0.1
-0.1
-0.2
-0.2
+0.1
carbon source
D-Glucosamine Hydrochloride (C)
+0.3
-0.3
+0.1
-0.5
+0.1
carbon source
D-Galactose (C)
-0.2
-0.1
+0.1
+0.2
-0.2
carbon source
Tween 20 (C)
+0.1
-0.1
+0.1
+0.1
-0.2
carbon source
D-Glucose (C)
-0.0
-0.3
-0.0
+0.3
-0.0
carbon source
D-Serine (C)
-0.1
-0.0
+0.2
+0.2
-0.3
nitrogen source
L-Proline (N)
+0.1
-0.2
-0.2
+0.2
+0.1
carbon source
L-Arabinose (C)
+0.2
-0.3
+0.0
+0.3
-0.2
carbon source
L-Asparagine (C)
+0.1
+0.2
-0.0
+0.0
-0.2
carbon source
D-Lactate (C)
+0.0
-0.1
+0.3
-0.3
+0.1
carbon source
a-Ketoglutaric (C)
+0.2
-0.2
+0.3
-0.2
+0.0
carbon source
L-Glutamine (C)
+0.2
+0.1
+0.0
+0.2
-0.2
carbon source
L-Arabinose (C)
+0.2
-0.2
-0.0
+0.3
-0.1
stress
Cisplatin 0.0125 mg/ml
-0.1
+0.1
+0.1
+0.2
-0.0
carbon source
succinate (C)
+0.2
+0.1
+0.2
+0.0
-0.1
carbon source
D-Mannose (C)
+0.2
+0.0
+0.2
-0.1
+0.1
carbon source
L-Valine (C)
-0.1
+0.1
+0.2
+0.2
+0.0
stress
Aluminum chloride 2.5 mM
-0.1
-0.1
+0.1
+0.2
+0.2
carbon source
D-Fructose (C)
+0.1
+0.1
+0.2
+0.3
-0.1
carbon source
D-Gluconic Acid (C)
+0.2
+0.1
+0.1
+0.4
-0.2
carbon source
Glycerol (C)
+0.2
+0.1
+0.2
+0.1
+0.1
carbon source
D-Serine (C)
+0.3
+0.1
+0.2
+0.2
-0.1
carbon source
D,L-Lactate (C)
+0.1
+0.4
+0.1
+0.0
+0.0
carbon source
L-Tryptophan (C)
+0.1
+0.1
+0.2
+0.3
+0.0
carbon source
D-Gluconic Acid (C)
+0.2
-0.1
+0.2
+0.3
+0.2
carbon source
octanoate (C)
+0.4
+0.4
+0.6
+0.2
-0.4
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