Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_1284 and PfGW456L13_1285 are separated by 9 nucleotidesPfGW456L13_1285 and PfGW456L13_1286 are separated by 162 nucleotidesPfGW456L13_1286 and PfGW456L13_1287 are separated by 30 nucleotidesPfGW456L13_1287 and PfGW456L13_1288 are separated by 221 nucleotides PfGW456L13_1284 - Putative transport protein, at 1,423,838 to 1,425,235 _1284 PfGW456L13_1285 - Single-stranded DNA-binding protein, at 1,425,245 to 1,425,763 _1285 PfGW456L13_1286 - Transcriptional Regulator, AraC family, at 1,425,926 to 1,426,798 _1286 PfGW456L13_1287 - membrane protein, at 1,426,829 to 1,427,329 _1287 PfGW456L13_1288 - Isochorismatase (EC 3.3.2.1), at 1,427,551 to 1,428,111 _1288
Group Condition PfGW456L13_1284 PfGW456L13_1285 PfGW456L13_1286 PfGW456L13_1287 PfGW456L13_1288
carbon source a-Ketoglutaric (C) -2.4 N.D. -0.1 +0.1 -0.8
nitrogen source D-Serine (N) -2.2 N.D. -0.3 -0.1 -0.1
carbon source L-Malic (C) -2.1 N.D. -0.3 +0.1 -0.2
nitrogen source L-Serine (N) -1.8 N.D. +0.1 -0.0 -0.5
carbon source D-Mannose (C) -2.0 N.D. +0.0 +0.0 -0.1
nitrogen source Gly-Glu (N) -1.7 N.D. +0.1 +0.0 -0.4
carbon source D-Fructose (C) -1.5 N.D. -0.0 +0.1 -0.6
nitrogen source Gly-DL-Asp (N) -0.9 N.D. -0.1 -0.0 -1.0
carbon source D-Lactate (C) -1.4 N.D. +0.1 +0.3 -0.9
carbon source Glycerol (C) -2.2 N.D. +0.1 +0.2 -0.0
nitrogen source Putrescine (N) -1.3 N.D. -0.1 -0.0 -0.3
carbon source L-Tryptophan (C) -0.7 N.D. +0.1 -0.2 -1.0
carbon source D-Gluconic Acid (C) -0.1 N.D. +0.1 -0.1 -1.6
nitrogen source Cytosine (N) -1.4 N.D. -0.1 -0.0 -0.1
nitrogen source L-Aspartic Acid (N) -1.6 N.D. +0.1 +0.1 -0.1
carbon source D-Galactose (C) -1.0 N.D. -0.2 -0.2 -0.2
carbon source Trisodium citrate (C) -0.9 N.D. -0.1 +0.0 -0.5
stress Dimethyl Sulfoxide 7.5 vol% -1.7 N.D. -0.1 +0.1 +0.2
carbon source Putrescine (C) -0.5 N.D. +0.2 -0.2 -0.8
nitrogen source L-Leucine (N) -1.3 N.D. +0.1 +0.0 -0.3
carbon source D,L-Lactate (C) -1.4 N.D. +0.1 -0.0 -0.0
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x -1.5 N.D. +0.0 +0.0 +0.2
carbon source D-Fructose (C) -1.5 N.D. +0.1 +0.1 +0.1
carbon source D-Glucosamine Hydrochloride (C) -1.1 N.D. -0.2 +0.2 +0.1
carbon source octanoate (C) -1.2 N.D. -0.1 -0.1 +0.5
stress Vancomycin 0.125 mg/ml -1.3 N.D. +0.1 -0.1 +0.5
carbon source D-Lactate (C) -1.3 N.D. +0.3 +0.2 +0.1
carbon source Glycerol (C) -1.0 N.D. -0.4 +0.1 +0.5
carbon source L-Alanine (C) -1.1 N.D. +0.1 +0.1 +0.3
stress Lomefloxacin 0.0004 mM -0.8 N.D. -0.2 -0.0 +0.7
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