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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1278 and PfGW456L13_1279 are separated by 22 nucleotides
PfGW456L13_1279 and PfGW456L13_1280 are separated by 42 nucleotides
PfGW456L13_1280 and PfGW456L13_1281 are separated by 237 nucleotides
PfGW456L13_1281 and PfGW456L13_1282 are separated by 148 nucleotides
PfGW456L13_1278 - SSU ribosomal protein S4p (S9e), at 1,416,367 to 1,416,987
_1278
PfGW456L13_1279 - DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6), at 1,417,010 to 1,418,011
_1279
PfGW456L13_1280 - LSU ribosomal protein L17p, at 1,418,054 to 1,418,440
_1280
PfGW456L13_1281 - Catalase (EC 1.11.1.6), at 1,418,678 to 1,420,132
_1281
PfGW456L13_1282 - Bacterioferritin, at 1,420,281 to 1,420,745
_1282
Group
Condition
PfGW456L13
_1278
PfGW456L13
_1279
PfGW456L13
_1280
PfGW456L13
_1281
PfGW456L13
_1282
stress
Aluminum chloride 2.5 mM
N.D.
N.D.
N.D.
-2.4
-0.0
stress
Bacitracin 1 mg/ml
N.D.
N.D.
N.D.
-2.0
-0.0
stress
Vancomycin 0.5 mg/ml
N.D.
N.D.
N.D.
-1.0
-0.6
stress
Aluminum chloride 5 mM
N.D.
N.D.
N.D.
-1.3
+0.2
stress
nitrate 200 mM
N.D.
N.D.
N.D.
-0.9
-0.1
stress
Lomefloxacin 0.0004 mM
N.D.
N.D.
N.D.
-0.7
-0.2
stress
Vancomycin 0.25 mg/ml
N.D.
N.D.
N.D.
-0.6
-0.2
stress
Thallium(I) acetate 0.002 mg/ml
N.D.
N.D.
N.D.
-0.7
-0.0
stress
D-Cycloserine 0.125 mg/ml
N.D.
N.D.
N.D.
-1.0
+0.3
stress
Bacitracin 0.5 mg/ml
N.D.
N.D.
N.D.
-0.9
+0.2
stress
Vancomycin 0.125 mg/ml
N.D.
N.D.
N.D.
-0.7
+0.0
stress
Nickel (II) chloride 1 mM
N.D.
N.D.
N.D.
-0.2
-0.5
stress
Chloride 400 mM
N.D.
N.D.
N.D.
-0.6
-0.0
carbon source
L-Tryptophan (C)
N.D.
N.D.
N.D.
-0.4
-0.2
lb
LB
N.D.
N.D.
N.D.
-0.4
-0.2
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
N.D.
-0.3
-0.2
stress
Fusidic 0.03 mg/ml
N.D.
N.D.
N.D.
-0.5
-0.0
stress
nitrite 5 mM
N.D.
N.D.
N.D.
-0.4
-0.1
stress
Thallium(I) acetate 0.004 mg/ml
N.D.
N.D.
N.D.
-0.6
+0.1
stress
Cobalt chloride 0.16 mM
N.D.
N.D.
N.D.
-0.2
-0.2
stress
Cisplatin 0.0125 mg/ml
N.D.
N.D.
N.D.
-0.4
-0.0
stress
Benzethonium chloride 0.0125 mM
N.D.
N.D.
N.D.
-0.5
+0.1
carbon source
D-Lactate (C)
N.D.
N.D.
N.D.
-0.0
-0.4
carbon source
L-Arabinose (C)
N.D.
N.D.
N.D.
-0.1
-0.3
stress
Thallium(I) acetate 0.008 mg/ml
N.D.
N.D.
N.D.
-0.6
+0.2
carbon source
Trisodium citrate (C)
N.D.
N.D.
N.D.
+0.3
-0.3
carbon source
D,L-Lactate (C)
N.D.
N.D.
N.D.
+0.3
-0.2
carbon source
succinate (C)
N.D.
N.D.
N.D.
+0.3
-0.2
nitrogen source
D-Serine (N)
N.D.
N.D.
N.D.
+0.4
+0.2
carbon source
octanoate (C)
N.D.
N.D.
N.D.
+0.1
+0.5
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