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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1234 and PfGW456L13_1235 are separated by 68 nucleotides
PfGW456L13_1235 and PfGW456L13_1236 are separated by 3 nucleotides
PfGW456L13_1236 and PfGW456L13_1237 are separated by 259 nucleotides
PfGW456L13_1237 and PfGW456L13_5170 are separated by 503 nucleotides
PfGW456L13_1234 - probable iron binding protein from the HesB_IscA_SufA family, at 1,375,134 to 1,375,484
_1234
PfGW456L13_1235 - Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-), at 1,375,553 to 1,376,644
_1235
PfGW456L13_1236 - Cell wall endopeptidase, family M23/M37, at 1,376,648 to 1,378,024
_1236
PfGW456L13_1237 - Tyrosyl-tRNA synthetase (EC 6.1.1.1), at 1,378,284 to 1,379,483
_1237
PfGW456L13_5170 - Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA, at 1,379,987 to 1,381,515
_5170
Group
Condition
PfGW456L13
_1234
PfGW456L13
_1235
PfGW456L13
_1236
PfGW456L13
_1237
PfGW456L13
_5170
nitrogen source
D-Serine (N)
N.D.
-4.8
-2.0
N.D.
N.D.
stress
Zinc 1 mM
N.D.
-2.1
-2.7
N.D.
N.D.
carbon source
D-Serine (C)
N.D.
-3.5
-0.9
N.D.
N.D.
stress
Dimethyl Sulfoxide 7.5 vol%
N.D.
-0.7
-3.2
N.D.
N.D.
stress
Aluminum chloride 5 mM
N.D.
-1.4
-1.7
N.D.
N.D.
stress
Benzethonium chloride 0.0125 mM
N.D.
-0.3
-2.8
N.D.
N.D.
stress
nitrate 200 mM
N.D.
-0.3
-2.8
N.D.
N.D.
carbon source
D-Serine (C)
N.D.
-2.4
-0.6
N.D.
N.D.
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
N.D.
-1.9
-1.0
N.D.
N.D.
stress
Paraquat dichloride 0.032 mg/ml
N.D.
-1.3
-1.4
N.D.
N.D.
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
N.D.
-1.4
-1.3
N.D.
N.D.
stress
Bacitracin 1 mg/ml
N.D.
+1.3
-3.9
N.D.
N.D.
carbon source
D-Alanine (C)
N.D.
-1.2
-1.1
N.D.
N.D.
stress
Bacitracin 0.5 mg/ml
N.D.
+0.6
-2.6
N.D.
N.D.
carbon source
D-Alanine (C)
N.D.
-1.1
-0.8
N.D.
N.D.
stress
Chloride 400 mM
N.D.
+0.5
-2.2
N.D.
N.D.
stress
Cephalothin 3 mg/ml
N.D.
+0.3
-2.1
N.D.
N.D.
stress
Vancomycin 0.25 mg/ml
N.D.
+1.2
-2.9
N.D.
N.D.
stress
Fusidic 0.03 mg/ml
N.D.
+0.1
-1.8
N.D.
N.D.
carbon source
D-Fructose (C)
N.D.
-0.8
-0.9
N.D.
N.D.
stress
Vancomycin 0.5 mg/ml
N.D.
+1.1
-2.7
N.D.
N.D.
stress
Vancomycin 0.125 mg/ml
N.D.
+1.2
-1.9
N.D.
N.D.
carbon source
Trisodium citrate (C)
N.D.
+0.5
-1.1
N.D.
N.D.
stress
Lomefloxacin 0.0004 mM
N.D.
+0.9
+0.9
N.D.
N.D.
carbon source
D-Mannose (C)
N.D.
+1.9
+0.7
N.D.
N.D.
stress
nitrite 5 mM
N.D.
+2.2
+0.8
N.D.
N.D.
carbon source
L-Alanine (C)
N.D.
+2.3
+1.2
N.D.
N.D.
carbon source
L-Alanine (C)
N.D.
+2.8
+1.0
N.D.
N.D.
carbon source
D-Glucosamine Hydrochloride (C)
N.D.
+4.4
+2.6
N.D.
N.D.
carbon source
octanoate (C)
N.D.
+9.3
+7.2
N.D.
N.D.
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