Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_1232 and PfGW456L13_1233 are separated by 135 nucleotidesPfGW456L13_1233 and PfGW456L13_1234 are separated by 166 nucleotidesPfGW456L13_1234 and PfGW456L13_1235 are separated by 68 nucleotidesPfGW456L13_1235 and PfGW456L13_1236 are separated by 3 nucleotides PfGW456L13_1232 - Protoporphyrinogen IX oxidase, novel form, HemJ (EC 1.3.-.-), at 1,373,369 to 1,373,797 _1232 PfGW456L13_1233 - N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38), at 1,373,933 to 1,374,967 _1233 PfGW456L13_1234 - probable iron binding protein from the HesB_IscA_SufA family, at 1,375,134 to 1,375,484 _1234 PfGW456L13_1235 - Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-), at 1,375,553 to 1,376,644 _1235 PfGW456L13_1236 - Cell wall endopeptidase, family M23/M37, at 1,376,648 to 1,378,024 _1236
Group Condition PfGW456L13_1232 PfGW456L13_1233 PfGW456L13_1234 PfGW456L13_1235 PfGW456L13_1236
nitrogen source D-Serine (N) N.D. -4.8 N.D. -4.8 -2.0
carbon source D-Serine (C) N.D. -5.2 N.D. -3.5 -0.9
carbon source D-Serine (C) N.D. -4.8 N.D. -2.4 -0.6
carbon source D-Alanine (C) N.D. -4.9 N.D. -1.2 -1.1
carbon source D-Alanine (C) N.D. -4.8 N.D. -1.1 -0.8
stress Dimethyl Sulfoxide 7.5 vol% N.D. -2.6 N.D. -0.7 -3.2
nitrogen source D-Alanine (N) N.D. -4.9 N.D. -1.0 -0.5
carbon source D-Fructose (C) N.D. -4.6 N.D. -0.8 -0.9
stress Chloride 400 mM N.D. -4.4 N.D. +0.5 -2.2
nitrogen source L-Valine (N) N.D. -5.0 N.D. -0.9 -0.1
carbon source L-Lactate (C) N.D. -4.4 N.D. -0.9 -0.7
nitrogen source L-Isoleucine (N) N.D. -5.0 N.D. -0.6 -0.2
carbon source L-Asparagine (C) N.D. -5.4 N.D. +0.0 -0.5
stress Bacitracin 1 mg/ml N.D. -3.0 N.D. +1.3 -3.9
carbon source Trisodium citrate (C) N.D. -4.8 N.D. +0.5 -1.1
stress Vancomycin 0.5 mg/ml N.D. -3.6 N.D. +1.1 -2.7
carbon source L-Phenylalanine (C) N.D. -4.8 N.D. +0.4 -0.7
carbon source L-Glutamine (C) N.D. -5.4 N.D. +0.3 +0.2
stress Bacitracin 0.5 mg/ml N.D. -2.9 N.D. +0.6 -2.6
carbon source D-Lactate (C) N.D. -5.1 N.D. +0.5 -0.2
stress Vancomycin 0.25 mg/ml N.D. -2.5 N.D. +1.2 -2.9
carbon source L-Tryptophan (C) N.D. -4.6 N.D. +1.2 -0.0
carbon source L-Valine (C) N.D. -4.7 N.D. +0.8 +0.5
carbon source L-Tryptophan (C) N.D. -4.6 N.D. +1.2 +0.1
carbon source L-Valine (C) N.D. -4.5 N.D. +1.0 +0.4
carbon source D-Mannose (C) N.D. -5.0 N.D. +1.9 +0.7
carbon source L-Alanine (C) N.D. -5.0 N.D. +2.8 +1.0
carbon source L-Alanine (C) N.D. -4.6 N.D. +2.3 +1.2
carbon source D-Glucosamine Hydrochloride (C) N.D. -1.6 N.D. +4.4 +2.6
carbon source octanoate (C) N.D. -2.3 N.D. +9.3 +7.2
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PfGW456L13_1232
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PfGW456L13_1233
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PfGW456L13_1235
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PfGW456L13_1236
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