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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1208 and PfGW456L13_1209 are separated by 68 nucleotides
PfGW456L13_1209 and PfGW456L13_1210 are separated by 358 nucleotides
PfGW456L13_1210 and PfGW456L13_1211 are separated by 48 nucleotides
PfGW456L13_1211 and PfGW456L13_1212 are separated by 214 nucleotides
PfGW456L13_1208 - Probable two-component sensor, near polyamine transporter, at 1,348,273 to 1,350,669
_1208
PfGW456L13_1209 - DNA-binding response regulator, LuxR family, near polyamine transporter, at 1,350,738 to 1,351,415
_1209
PfGW456L13_1210 - Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1), at 1,351,774 to 1,352,898
_1210
PfGW456L13_1211 - ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1), at 1,352,947 to 1,353,990
_1211
PfGW456L13_1212 - Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1), at 1,354,205 to 1,355,452
_1212
Group
Condition
PfGW456L13
_1208
PfGW456L13
_1209
PfGW456L13
_1210
PfGW456L13
_1211
PfGW456L13
_1212
carbon source
L-Arabinose (C)
-0.2
-0.4
-0.4
-0.6
-2.8
carbon source
L-Arabinose (C)
-0.3
-0.4
-0.4
-0.4
-2.5
carbon source
octanoate (C)
+0.4
-0.8
-0.4
-0.7
-1.8
carbon source
D-Galactose (C)
-0.1
-0.3
-0.1
-0.6
-1.4
carbon source
D-Fructose (C)
-0.2
-1.1
-0.2
+0.2
-1.3
carbon source
a-Ketoglutaric (C)
-0.0
-0.1
-1.3
-0.4
-0.6
carbon source
D-Galactose (C)
-0.3
+0.1
-0.4
-0.4
-1.3
carbon source
Trisodium citrate (C)
-0.2
-0.1
-0.4
-0.2
-1.2
carbon source
Glycerol (C)
+0.1
-1.0
-0.7
+0.1
-0.5
carbon source
D-Alanine (C)
+0.2
-0.1
-0.2
-0.1
-1.7
carbon source
D-Fructose (C)
-0.3
-0.9
+0.2
+0.0
-1.0
carbon source
L-Malic (C)
-0.1
-0.5
-0.1
-0.3
-1.0
carbon source
L-Phenylalanine (C)
-0.3
+0.1
-0.4
-0.1
-1.1
carbon source
L-Tryptophan (C)
+0.2
-0.4
-0.2
-0.2
-1.0
carbon source
L-Phenylalanine (C)
-0.3
+0.2
-0.4
-0.1
-1.1
carbon source
D-Glucosamine Hydrochloride (C)
-0.1
-0.0
-0.5
-0.3
-0.7
carbon source
D-Gluconic Acid (C)
+0.0
-0.1
-0.6
-0.1
-0.8
carbon source
D-Mannose (C)
-0.1
+0.2
-0.5
-0.2
-0.9
carbon source
D-Mannose (C)
+0.1
-0.1
-0.4
-0.1
-1.0
carbon source
D-Alanine (C)
+0.1
+0.1
-0.0
-0.3
-1.3
nitrogen source
Gly-DL-Asp (N)
-0.5
+0.2
-0.1
-0.1
-0.8
carbon source
Glycerol (C)
-0.0
+0.5
-0.4
-0.3
-1.0
carbon source
L-Alanine (C)
+0.1
-0.4
-0.2
-0.1
-0.7
carbon source
D-Gluconic Acid (C)
-0.2
+0.4
-0.2
-0.1
-0.7
carbon source
D-Lactate (C)
-0.3
+0.2
+0.1
-0.1
-0.6
carbon source
Putrescine (C)
+0.1
+0.9
-0.4
+0.2
-1.3
carbon source
L-Lactate (C)
+0.2
+0.0
+0.2
-0.2
-0.8
carbon source
a-Ketoglutaric (C)
-0.1
+0.3
-0.0
+0.1
-0.8
nitrogen source
L-Threonine (N)
-0.1
+0.6
-0.0
-0.1
-0.6
stress
Lomefloxacin 0.0004 mM
+0.0
-0.7
+0.2
+0.4
+0.4
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