Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_1200 and PfGW456L13_1201 overlap by 4 nucleotidesPfGW456L13_1201 and PfGW456L13_1202 overlap by 4 nucleotidesPfGW456L13_1202 and PfGW456L13_1203 overlap by 20 nucleotidesPfGW456L13_1203 and PfGW456L13_1204 are separated by 130 nucleotides PfGW456L13_1200 - SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182), at 1,338,598 to 1,339,407 _1200 PfGW456L13_1201 - 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262), at 1,339,404 to 1,340,393 _1201 PfGW456L13_1202 - Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8), at 1,340,390 to 1,341,706 _1202 PfGW456L13_1203 - Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor, at 1,341,687 to 1,344,485 _1203 PfGW456L13_1204 - COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases, at 1,344,616 to 1,345,635 _1204
Group Condition PfGW456L13_1200 PfGW456L13_1201 PfGW456L13_1202 PfGW456L13_1203 PfGW456L13_1204
nitrogen source D-Serine (N) N.D. N.D. N.D. N.D. -4.8
carbon source D-Serine (C) N.D. N.D. N.D. N.D. -2.9
carbon source D-Serine (C) N.D. N.D. N.D. N.D. -2.9
stress Zinc 1 mM N.D. N.D. N.D. N.D. -2.3
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x N.D. N.D. N.D. N.D. -2.3
stress Aluminum chloride 5 mM N.D. N.D. N.D. N.D. -1.6
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x N.D. N.D. N.D. N.D. -1.6
carbon source D-Alanine (C) N.D. N.D. N.D. N.D. -1.3
carbon source D-Alanine (C) N.D. N.D. N.D. N.D. -1.1
stress Paraquat dichloride 0.032 mg/ml N.D. N.D. N.D. N.D. -1.1
nitrogen source D-Alanine (N) N.D. N.D. N.D. N.D. -1.0
nitrogen source L-Valine (N) N.D. N.D. N.D. N.D. -0.9
nitrogen source L-Alanine (N) N.D. N.D. N.D. N.D. -0.5
carbon source L-Valine (C) N.D. N.D. N.D. N.D. +0.6
stress Bacitracin 0.5 mg/ml N.D. N.D. N.D. N.D. +0.7
carbon source L-Valine (C) N.D. N.D. N.D. N.D. +0.7
carbon source L-Malic (C) N.D. N.D. N.D. N.D. +0.8
carbon source L-Tryptophan (C) N.D. N.D. N.D. N.D. +0.9
carbon source L-Tryptophan (C) N.D. N.D. N.D. N.D. +0.9
nitrogen source L-Proline (N) N.D. N.D. N.D. N.D. +1.0
stress Vancomycin 0.125 mg/ml N.D. N.D. N.D. N.D. +1.3
carbon source D-Mannose (C) N.D. N.D. N.D. N.D. +1.3
stress Vancomycin 0.25 mg/ml N.D. N.D. N.D. N.D. +1.5
stress Bacitracin 1 mg/ml N.D. N.D. N.D. N.D. +1.6
stress Vancomycin 0.5 mg/ml N.D. N.D. N.D. N.D. +1.8
stress nitrite 5 mM N.D. N.D. N.D. N.D. +1.8
carbon source L-Alanine (C) N.D. N.D. N.D. N.D. +2.2
carbon source L-Alanine (C) N.D. N.D. N.D. N.D. +2.3
carbon source D-Glucosamine Hydrochloride (C) N.D. N.D. N.D. N.D. +3.7
carbon source octanoate (C) N.D. N.D. N.D. N.D. +9.0
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