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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_112 and PfGW456L13_113 are separated by 23 nucleotides
PfGW456L13_113 and PfGW456L13_114 are separated by 29 nucleotides
PfGW456L13_114 and PfGW456L13_115 are separated by 173 nucleotides
PfGW456L13_115 and PfGW456L13_116 are separated by 99 nucleotides
PfGW456L13_112 - Urease accessory protein UreF, at 129,912 to 130,586
_112
PfGW456L13_113 - Urease accessory protein UreG, at 130,610 to 131,224
_113
PfGW456L13_114 - HupE-UreJ family metal transporter, at 131,254 to 131,826
_114
PfGW456L13_115 - Mannose-6-phosphate isomerase (EC 5.3.1.8), at 132,000 to 133,133
_115
PfGW456L13_116 - Cobalt-zinc-cadmium resistance protein, at 133,233 to 134,138
_116
Group
Condition
PfGW456L13
_112
PfGW456L13
_113
PfGW456L13
_114
PfGW456L13
_115
PfGW456L13
_116
stress
Nickel (II) chloride 1 mM
N.D.
-0.3
-0.3
-2.6
+0.0
carbon source
a-Ketoglutaric (C)
N.D.
-0.9
-0.4
-0.4
+0.1
stress
Lomefloxacin 0.0004 mM
N.D.
-0.1
-0.0
-1.0
-0.1
stress
Zinc 1 mM
N.D.
-0.2
-0.0
-0.6
-0.2
nitrogen source
NAG (N)
N.D.
-0.4
-0.6
+0.2
-0.1
carbon source
octanoate (C)
N.D.
+0.1
+0.0
-0.7
-0.3
carbon source
L-Valine (C)
N.D.
-0.2
-0.3
-0.1
-0.2
stress
Bacitracin 1 mg/ml
N.D.
+0.1
-0.1
-0.5
-0.1
stress
Vancomycin 0.5 mg/ml
N.D.
+0.2
-0.2
-0.5
-0.1
stress
Fusidic 0.03 mg/ml
N.D.
+0.1
-0.4
-0.3
-0.1
carbon source
a-Ketoglutaric (C)
N.D.
-0.4
+0.2
-0.4
-0.0
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
N.D.
-0.0
-0.6
+0.1
-0.1
stress
Cephalothin 3 mg/ml
N.D.
+0.1
-0.2
-0.4
-0.0
carbon source
Tween 20 (C)
N.D.
-0.0
+0.2
-0.6
-0.0
carbon source
D-Gluconic Acid (C)
N.D.
-0.1
-0.6
+0.2
+0.1
nitrogen source
L-Glutamine (N)
N.D.
-0.4
+0.2
-0.1
-0.0
carbon source
Glycerol (C)
N.D.
+0.1
-0.4
+0.2
-0.3
carbon source
D-Alanine (C)
N.D.
+0.1
+0.3
-0.2
-0.2
carbon source
L-Tryptophan (C)
N.D.
-0.3
+0.1
+0.3
+0.1
stress
Thallium(I) acetate 0.002 mg/ml
N.D.
+0.1
+0.2
+0.3
-0.2
carbon source
Glycerol (C)
N.D.
+0.5
-0.1
+0.2
-0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
N.D.
+0.5
-0.3
+0.2
+0.1
carbon source
L-Lactate (C)
N.D.
+0.0
+0.4
-0.1
+0.3
stress
Thallium(I) acetate 0.004 mg/ml
N.D.
-0.1
-0.0
+0.9
-0.1
carbon source
L-Glutamine (C)
N.D.
-0.1
-0.3
+1.6
-0.3
carbon source
casaminos (C)
N.D.
+0.1
+0.1
+0.4
+0.1
stress
Aluminum chloride 2.5 mM
N.D.
-0.1
-0.1
+1.2
-0.1
stress
Aluminum chloride 5 mM
N.D.
-0.1
+0.4
+0.5
+0.1
carbon source
D-Galactose (C)
N.D.
+0.3
+0.1
+0.4
+0.1
carbon source
L-Glutamine (C)
N.D.
-0.0
-0.3
+1.5
+0.0
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