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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_1062 and PfGW456L13_1063 are separated by 99 nucleotides
PfGW456L13_1063 and PfGW456L13_1064 are separated by 12 nucleotides
PfGW456L13_1064 and PfGW456L13_1065 are separated by 79 nucleotides
PfGW456L13_1065 and PfGW456L13_1066 are separated by 12 nucleotides
PfGW456L13_1062 - Transcriptional regulator, ArsR family / Methyltransferase fusion, at 1,177,216 to 1,178,211
_1062
PfGW456L13_1063 - hypothetical protein, at 1,178,311 to 1,178,550
_1063
PfGW456L13_1064 - Transketolase (EC 2.2.1.1), at 1,178,563 to 1,180,470
_1064
PfGW456L13_1065 - D-erythrose-4-phosphate dehydrogenase, at 1,180,550 to 1,181,710
_1065
PfGW456L13_1066 - Phosphoglycerate kinase (EC 2.7.2.3), at 1,181,723 to 1,182,886
_1066
Group
Condition
PfGW456L13
_1062
PfGW456L13
_1063
PfGW456L13
_1064
PfGW456L13
_1065
PfGW456L13
_1066
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.2
-0.6
N.D.
N.D.
N.D.
nitrogen source
Cytosine (N)
-0.7
-0.0
N.D.
N.D.
N.D.
stress
Nickel (II) chloride 1 mM
-0.5
-0.2
N.D.
N.D.
N.D.
nitrogen source
L-Threonine (N)
-0.6
+0.0
N.D.
N.D.
N.D.
stress
Fusidic 0.03 mg/ml
-0.2
-0.4
N.D.
N.D.
N.D.
carbon source
D-Fructose (C)
-0.2
-0.3
N.D.
N.D.
N.D.
carbon source
D,L-Lactate (C)
-0.2
-0.3
N.D.
N.D.
N.D.
control
LB control
-0.3
-0.2
N.D.
N.D.
N.D.
nitrogen source
L-Glutamine (N)
+0.0
-0.4
N.D.
N.D.
N.D.
stress
Bacitracin 1 mg/ml
+0.0
-0.4
N.D.
N.D.
N.D.
carbon source
D-Lactate (C)
+0.2
-0.5
N.D.
N.D.
N.D.
carbon source
L-Malic (C)
+0.2
-0.4
N.D.
N.D.
N.D.
stress
Chloride 400 mM
-0.3
+0.2
N.D.
N.D.
N.D.
carbon source
D-Serine (C)
-0.3
+0.2
N.D.
N.D.
N.D.
carbon source
D-Lactate (C)
+0.2
-0.2
N.D.
N.D.
N.D.
carbon source
L-Glutamine (C)
-0.2
+0.2
N.D.
N.D.
N.D.
carbon source
L-Tryptophan (C)
-0.1
+0.5
N.D.
N.D.
N.D.
carbon source
L-Histidine (C)
+0.2
+0.2
N.D.
N.D.
N.D.
nitrogen source
L-Citrulline (N)
+0.4
+0.1
N.D.
N.D.
N.D.
stress
Aluminum chloride 2.5 mM
-0.0
+0.5
N.D.
N.D.
N.D.
nitrogen source
Gly-DL-Asp (N)
+0.2
+0.2
N.D.
N.D.
N.D.
nitrogen source
L-Proline (N)
+0.2
+0.3
N.D.
N.D.
N.D.
carbon source
octanoate (C)
-0.6
+1.2
N.D.
N.D.
N.D.
stress
Aluminum chloride 5 mM
+0.1
+0.5
N.D.
N.D.
N.D.
stress
nitrate 200 mM
-0.1
+0.7
N.D.
N.D.
N.D.
nitrogen source
L-Arginine (N)
+0.2
+0.5
N.D.
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
+0.4
+0.3
N.D.
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
+0.2
+0.5
N.D.
N.D.
N.D.
nitrogen source
L-Valine (N)
+0.5
+0.3
N.D.
N.D.
N.D.
stress
Lomefloxacin 0.0004 mM
+0.4
+0.6
N.D.
N.D.
N.D.
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