Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_1016 and PfGW456L13_1017 are separated by 27 nucleotidesPfGW456L13_1017 and PfGW456L13_1018 are separated by 79 nucleotidesPfGW456L13_1018 and PfGW456L13_1019 overlap by 1 nucleotidesPfGW456L13_1019 and PfGW456L13_1020 are separated by 181 nucleotides PfGW456L13_1016 - Aspartate carbamoyltransferase (EC 2.1.3.2), at 1,127,333 to 1,128,352 _1016 PfGW456L13_1017 - Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR, at 1,128,380 to 1,128,883 _1017 PfGW456L13_1018 - Putative Holliday junction resolvase YggF, at 1,128,963 to 1,129,400 _1018 PfGW456L13_1019 - UPF0301 protein YqgE, at 1,129,400 to 1,129,972 _1019 PfGW456L13_1020 - Ferric siderophore transport system, periplasmic binding protein TonB, at 1,130,154 to 1,131,053 _1020
Group Condition PfGW456L13_1016 PfGW456L13_1017 PfGW456L13_1018 PfGW456L13_1019 PfGW456L13_1020
carbon source Trisodium citrate (C) N.D. -2.2 N.D. -0.5 -5.1
carbon source D-Galactose (C) N.D. -0.7 N.D. -0.9 -3.9
carbon source Putrescine (C) N.D. -2.3 N.D. -0.4 -2.2
carbon source D-Fructose (C) N.D. -0.7 N.D. +0.2 -3.4
carbon source succinate (C) N.D. -1.6 N.D. -0.2 -1.7
nitrogen source Uridine (N) N.D. -0.4 N.D. -0.4 -2.6
nitrogen source NAG (N) N.D. -1.7 N.D. +0.2 -1.8
carbon source D-Galactose (C) N.D. +0.2 N.D. -0.5 -2.7
nitrogen source L-Threonine (N) N.D. -0.3 N.D. -0.4 -2.2
carbon source L-Valine (C) N.D. -0.6 N.D. +0.2 -2.4
nitrogen source L-Valine (N) N.D. -0.4 N.D. -0.0 -2.3
carbon source L-Alanine (C) N.D. -0.4 N.D. -0.1 -2.2
carbon source octanoate (C) N.D. +0.8 N.D. -0.4 -3.0
stress Bacitracin 1 mg/ml N.D. +0.2 N.D. -0.2 -2.6
carbon source L-Asparagine (C) N.D. -1.1 N.D. -0.2 -1.2
carbon source D-Alanine (C) N.D. -0.8 N.D. +0.2 -1.9
carbon source L-Alanine (C) N.D. -0.6 N.D. -0.5 -1.5
carbon source D-Lactate (C) N.D. -1.4 N.D. -0.2 -0.9
carbon source D-Gluconic Acid (C) N.D. -0.3 N.D. -0.1 -2.0
carbon source a-Ketoglutaric (C) N.D. -1.5 N.D. +0.3 -1.2
carbon source D-Glucose (C) N.D. -2.2 N.D. +0.1 -0.2
stress Vancomycin 0.5 mg/ml N.D. +0.2 N.D. -0.0 -2.3
carbon source L-Valine (C) N.D. +0.6 N.D. +0.1 -2.6
stress Lomefloxacin 0.0004 mM N.D. -0.2 N.D. +0.3 -1.9
carbon source L-Arabinose (C) N.D. -0.5 N.D. +0.6 -1.6
carbon source D-Serine (C) N.D. +0.7 N.D. -0.7 -1.3
carbon source D-Gluconic Acid (C) N.D. +0.7 N.D. -0.3 -1.6
carbon source D-Mannose (C) N.D. +1.2 N.D. +0.1 -1.2
carbon source L-Malic (C) N.D. +1.4 N.D. -0.1 -0.9
carbon source L-Histidine (C) N.D. +1.5 N.D. -0.1 -0.9
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