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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_99 and PfGW456L13_100 are separated by 306 nucleotides
PfGW456L13_100 and PfGW456L13_101 are separated by 97 nucleotides
PfGW456L13_101 and PfGW456L13_102 are separated by 113 nucleotides
PfGW456L13_102 and PfGW456L13_103 are separated by 96 nucleotides
PfGW456L13_99 - hypothetical protein, at 114,222 to 118,439
_99
PfGW456L13_100 - Transcriptional regulator, AraC family, at 118,746 to 119,528
_100
PfGW456L13_101 - Permease of the drug/metabolite transporter (DMT) superfamily, at 119,626 to 120,513
_101
PfGW456L13_102 - Lipase precursor (EC 3.1.1.3), at 120,627 to 121,517
_102
PfGW456L13_103 - Quaternary ammonium compound-resistance protein SugE, at 121,614 to 121,919
_103
Group
Condition
PfGW456L13
_99
PfGW456L13
_100
PfGW456L13
_101
PfGW456L13
_102
PfGW456L13
_103
carbon source
D,L-Lactate (C)
+0.1
-0.2
+0.0
-0.1
-0.8
carbon source
a-Ketoglutaric (C)
-0.2
-0.6
+0.1
-0.3
+0.2
stress
Fusidic 0.03 mg/ml
-0.0
-0.7
+0.0
-0.1
+0.1
stress
Bacitracin 1 mg/ml
-0.1
-0.5
-0.0
+0.1
-0.1
carbon source
L-Arabinose (C)
-0.1
+0.6
-0.1
-0.4
-0.6
stress
Fusidic 0.08 mg/ml
+0.0
-0.5
-0.1
-0.1
+0.2
carbon source
D-Fructose (C)
+0.1
-0.1
+0.1
+0.2
-0.8
carbon source
succinate (C)
+0.1
-0.5
+0.2
-0.4
+0.2
carbon source
D-Galactose (C)
-0.1
+0.5
-0.1
+0.2
-0.7
carbon source
L-Tryptophan (C)
+0.1
-0.2
+0.3
-0.2
-0.2
carbon source
D-Gluconic Acid (C)
+0.2
+0.0
-0.4
-0.3
+0.2
lb
LB
-0.1
+0.3
+0.1
-0.1
-0.3
carbon source
octanoate (C)
-0.3
-0.3
+0.1
+0.2
+0.2
nitrogen source
L-Isoleucine (N)
+0.0
+0.3
-0.1
+0.2
-0.5
carbon source
L-Histidine (C)
+0.1
-0.4
-0.0
+0.2
+0.3
nitrogen source
D-Serine (N)
+0.1
+0.4
-0.1
+0.1
-0.3
carbon source
Putrescine (C)
+0.1
-0.6
-0.1
+0.2
+0.6
nitrogen source
Putrescine (N)
+0.1
+0.2
-0.0
+0.2
-0.3
nitrogen source
L-Valine (N)
+0.0
-0.2
-0.2
+0.3
+0.4
carbon source
D-Glucosamine Hydrochloride (C)
+0.1
+0.3
+0.0
+0.2
-0.2
nitrogen source
L-Asparagine (N)
+0.2
+0.2
-0.2
+0.3
-0.2
carbon source
a-Ketoglutaric (C)
-0.1
+0.4
+0.3
+0.3
-0.4
carbon source
Glycerol (C)
+0.1
+0.5
-0.1
-0.1
+0.0
carbon source
L-Arabinose (C)
+0.1
+0.5
-0.1
+0.0
-0.1
carbon source
Glycerol (C)
+0.1
+0.2
-0.4
+0.4
+0.2
stress
Aluminum chloride 5 mM
+0.1
+0.8
-0.2
+0.1
-0.2
carbon source
L-Valine (C)
+0.0
-0.0
-0.2
+0.3
+0.4
carbon source
D-Mannose (C)
+0.1
+0.4
+0.1
+0.2
-0.3
carbon source
L-Lactate (C)
+0.1
+0.5
-0.1
+0.3
-0.2
nitrogen source
Ammonium chloride (N)
+0.0
+0.2
-0.2
+0.2
+0.4
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