Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_5345 and PP_5346 are separated by 119 nucleotidesPP_5346 and PP_5347 are separated by 11 nucleotidesPP_5347 and PP_5348 are separated by 189 nucleotidesPP_5348 and PP_5730 overlap by 59 nucleotides PP_5345: PP_5345 - Acetyltransferase, GNAT family, at 6,092,671 to 6,093,342 _5345 PP_5346: PP_5346 - pyruvate carboxylase subunit B, at 6,093,462 to 6,095,270 _5346 PP_5347: PP_5347 - pyruvate carboxylase subunit A, at 6,095,282 to 6,096,697 _5347 PP_5348: PP_5348 - Transcriptional regulator, LysR family, at 6,096,887 to 6,097,849 _5348 PP_5730: PP_5730 - conserved protein of unknown function, at 6,097,791 to 6,098,009 _5730
Group Condition PP_5345 PP_5346 PP_5347 PP_5348 PP_5730
carbon source L-Valine (C) -0.2 -6.5 -6.5 -5.3 -0.1
carbon source DL-3-Hydroxyisobutyric (C) -0.2 -5.9 -5.6 -6.8 +0.2
carbon source DL-3-Hydroxyisobutyric (C) +0.1 -6.8 -5.5 -6.3 +0.3
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.8 -6.8 -5.2 -5.6 +0.4
carbon source L-Isoleucine (C) +0.0 -5.8 -6.1 -5.6 +0.1
pH D-Glucose (C) pH 6 -0.2 -5.8 -5.2 -5.7 +0.2
carbon source gluconate (C) -0.2 -5.6 -5.5 -5.1 -0.3
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL +0.0 -6.1 -4.7 -5.9 +0.0
pH D-Glucose (C) pH 7.5 -0.6 -5.1 -5.1 -5.7 -0.2
pH D-Glucose (C) pH 6 +0.1 -6.2 -4.9 -5.6 +0.1
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL +0.0 -6.1 -4.9 -5.5 +0.2
stress MOPS minimal media_Glucose20mM with Chloride 200 mM +0.2 -6.2 -4.8 -5.3 -0.1
pH D-Glucose (C) pH 6.5 -0.2 -5.6 -4.9 -5.6 +0.2
carbon source D-Glucose (C) +0.1 -6.0 -5.1 -5.1 -0.0
temperature shift Temperature shift 30_to_25 -0.0 -5.4 -5.3 -5.0 -0.3
carbon source L-Isoleucine (C) +0.1 -5.6 -5.8 -4.9 +0.2
carbon source Levulinic Acid (C) -0.0 -4.6 -5.3 -6.0 -0.0
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL +0.2 -5.6 -5.4 -5.2 +0.1
carbon source 1,2-Propanediol (C) -0.2 -5.2 -5.4 -5.0 -0.0
pH D-Glucose (C) pH 7.5 +0.1 -6.1 -4.7 -5.1 +0.1
carbon source Levulinic Acid (C) -0.0 -4.9 -5.2 -5.6 -0.0
temperature Growth at 25C; with MOPS -0.3 -4.8 -4.3 -6.1 -0.3
temperature Growth at 34C -0.3 -6.1 -4.8 -4.6 +0.2
carbon source gluconate (C) -0.1 -5.0 -5.2 -5.3 -0.1
pH pH 5 +0.1 -4.9 -5.1 -5.7 +0.2
carbon source 2-Keto-D-gluconic hemicalcium salt (C) +0.0 -5.2 -5.3 -5.5 +0.4
carbon source 2-Keto-D-gluconic hemicalcium salt (C) +0.1 -5.8 -4.7 -5.3 +0.2
carbon source Levulinic Acid (C) -0.2 -4.8 -5.3 -5.4 +0.2
pH D-Glucose (C) pH 7 +0.2 -5.3 -4.7 -5.5 +0.5
carbon source D-Fructose (C) -0.5 -5.4 -5.1 -4.3 +0.5
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