Fitness for 5 genes in Pseudomonas putida KT2440

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1005 experiments or choose conditions or try the comparative fitness browser

500 ntPP_5300 and PP_5301 are separated by 240 nucleotidesPP_5301 and PP_5302 are separated by 59 nucleotidesPP_5302 and PP_5303 are separated by 23 nucleotidesPP_5303 and PP_5304 are separated by 56 nucleotides PP_5300: PP_5300 - Transcriptional regulator, LysR family, at 6,047,526 to 6,048,575 _5300 PP_5301: PP_5301 - DNA-directed RNA polymerase subunit omega, at 6,048,816 to 6,049,079 _5301 PP_5302: PP_5302 - bifunctional (p)ppGpp synthase/hydrolase, at 6,049,139 to 6,051,247 _5302 PP_5303: PP_5303 - aminoacrylate/iminopropionate hydrolase/deaminase, at 6,051,271 to 6,051,651 _5303 PP_5304: PP_5304 - putative Lipoprotein, at 6,051,708 to 6,052,439 _5304
Group Condition PP_5300 PP_5301 PP_5302 PP_5303 PP_5304
pH Growth at pH7 and (C) D-Glucose +0.2 N.D. N.D. -6.9 -0.2
temperature shift Temperature shift 30_to_25 +0.1 N.D. N.D. -6.6 -0.0
temperature shift Temperature shift 30_to_25; with MOPS +0.1 N.D. N.D. -6.3 -0.1
pH Growth at pH6 and (C) Trisodium citrate -0.0 N.D. N.D. -6.4 +0.1
pH Growth at pH6 and (C) Trisodium citrate +0.3 N.D. N.D. -6.1 -0.1
temperature shift Temperature shift 30_to_25 +0.3 N.D. N.D. -6.4 +0.2
carbon source Vanillin (C) +0.0 N.D. N.D. -5.8 -0.1
carbon source Vanillin (C) -0.2 N.D. N.D. -5.5 -0.1
pH Growth at pH7 and (C) D-Glucose +0.1 N.D. N.D. -5.6 -0.3
nitrogen source D-Lysine (N) +0.1 N.D. N.D. -5.7 +0.1
carbon source Protocatechuic Acid (C) +0.0 N.D. N.D. -5.4 +0.0
carbon source acetate (C) +0.3 N.D. N.D. -5.4 -0.3
pH Growth at pH8 and (C) D-Glucose +0.0 N.D. N.D. -5.5 +0.2
temperature shift Temperature shift 10_to_30; with MOPS -0.2 N.D. N.D. -5.2 +0.1
carbon source Myristic (C) +0.0 N.D. N.D. -5.5 +0.2
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.3 N.D. N.D. -4.7 -0.3
temperature shift Temperature shift 10_to_25; with MOPS -0.4 N.D. N.D. -4.7 -0.2
nitrogen source Urea (N) -0.0 N.D. N.D. -5.1 -0.1
nitrogen source L-Serine (N) +0.1 N.D. N.D. -5.3 +0.1
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL -0.1 N.D. N.D. -5.1 +0.1
nitrogen source Ammonium chloride (N); with MOPS +0.0 N.D. N.D. -5.1 -0.1
phage FRSphage +0.2 N.D. N.D. -5.2 -0.0
nitrogen source Propandiamine (N) -0.7 N.D. N.D. -4.6 +0.4
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL +0.0 N.D. N.D. -5.1 +0.1
stress MOPS minimal media_Glucose20mM with Chloride 200 mM +0.0 N.D. N.D. -5.0 +0.1
nitrogen source nitrite (N) +0.1 N.D. N.D. -5.0 +0.0
carbon source carbon source Bisabolene 48.9 mM +0.2 N.D. N.D. -4.9 -0.0
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.1 N.D. N.D. -4.8 +0.2
nitrogen source Propandiamine (N) -0.8 N.D. N.D. -4.1 +0.3
pH Growth at pH8 and (C) Trisodium citrate -0.0 N.D. N.D. -4.7 +0.3
remove
PP_5300
plot		 remove
PP_5301
plot		 remove
PP_5302		 remove
PP_5303
plot		 remove
PP_5304
plot