Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_5110 and PP_5111 overlap by 4 nucleotidesPP_5111 and PP_5112 are separated by 231 nucleotidesPP_5112 and PP_5113 overlap by 8 nucleotidesPP_5113 and PP_5114 overlap by 1 nucleotides PP_5110: PP_5110 - cytokinetic ring ABC transporter-like subunit - ATP-binding subunit, at 5,829,985 to 5,830,662 _5110 PP_5111: PP_5111 - Signal Recognition Particle protein translocation receptor GTPase, at 5,830,659 to 5,832,143 _5111 PP_5112: PP_5112 - putative processin peptidase, at 5,832,375 to 5,833,730 _5112 PP_5113: PP_5113 - predicted Zn-dependent peptidases, at 5,833,723 to 5,835,213 _5113 PP_5114: PP_5114 - putative adenine methyltransferase, at 5,835,213 to 5,835,815 _5114
Group Condition PP_5110 PP_5111 PP_5112 PP_5113 PP_5114
phage P. put South MOI 1 -0.3 N.D. -0.3 -1.5 -6.9
phage P. put PUT 10 MOI 10 -0.0 N.D. -0.6 -1.4 -6.8
phage P. putida South MOI 0.1 -0.5 N.D. -0.4 -1.3 -6.6
phage P. putida PUT10 MOI 10 -0.2 N.D. -0.5 -1.4 -6.7
phage P. put South MOI 0.1 -0.1 N.D. -0.4 -1.3 -6.7
phage P. put South MOI 0.1 -0.5 N.D. -0.5 -0.9 -6.6
phage PUT8 MOI 0.1 -0.4 N.D. -0.2 -0.9 -6.9
phage P. putida PUT10 MOI 10 +0.4 N.D. -0.6 -1.3 -6.7
phage P. put PUT 10 MOI 1 -0.0 N.D. -0.4 -1.0 -6.6
phage P. putida PUT10 MOI 1 +0.6 N.D. -0.3 -1.1 -6.7
phage PUT 8 MOI 1 +0.5 N.D. -0.3 -0.9 -6.8
phage PUT8 MOI 0.1 +0.0 N.D. -0.1 -0.5 -6.8
phage P. put South MOI 1 +0.1 N.D. -0.4 -1.4 -5.7
phage P. put PUT 10 MOI 0.1 -1.0 N.D. -0.3 -1.0 -4.9
phage P. putida PUT10 MOI 1 -0.2 N.D. -0.2 -1.2 -5.4
phage PUT8 MOI 10 +0.7 N.D. -0.2 -0.5 -6.8
phage P. putida PUT10 MOI 0.1 +0.4 N.D. -0.3 -1.2 -5.5
phage P. put PUT 10 MOI 10 -0.5 N.D. -0.5 -1.1 -4.2
phage P. putida PUT10 MOI 0.1 +0.0 N.D. -0.3 -1.3 -4.7
phage P. put PUT 10 MOI 1 +0.2 N.D. -0.5 -0.9 -4.8
phage P. put PUT 10 MOI 0.1 +0.6 N.D. -0.5 -1.0 -4.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8 N.D. +0.5 -0.2 -5.2
phage P. putida South MOI 0.1 -0.0 N.D. -0.4 -1.1 -4.2
phage P. putida South MOI 1 -0.4 N.D. -0.3 -1.2 -3.2
phage P. putida South MOI 10 -0.9 N.D. -0.0 -0.3 -3.9
phage PUT8 MOI 10 +0.9 N.D. -0.4 -0.9 -4.5
pH Growth at pH7 and (C) Trisodium citrate +1.0 N.D. +0.2 -0.3 -5.5
carbon source Delta-Decalactone (C) -1.3 N.D. +0.4 +0.3 -3.9
carbon source ferulate (C); with MOPS +1.1 N.D. -0.5 -0.2 -4.3
carbon source Tween 20 (C) +0.5 N.D. +0.1 +0.5 -4.5
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