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Protein
Homologs
Fitness for 5 genes in
Pseudomonas putida KT2440
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500 nt
PP_5095 and PP_5096 are separated by 10 nucleotides
PP_5096 and PP_5097 are separated by 99 nucleotides
PP_5097 and PP_5098 overlap by 11 nucleotides
PP_5098 and PP_5099 are separated by 22 nucleotides
PP_5095: PP_5095 - pyrroline-5-carboxylate reductase, at 5,818,732 to 5,819,550
_5095
PP_5096: PP_5096 - putative factor involved in shape determination, at 5,819,561 to 5,820,151
_5096
PP_5097: PP_5097 - homoserine O-acetyltransferase, at 5,820,251 to 5,821,390
_5097
PP_5098: PP_5098 - methionine biosynthesis protein MetW, at 5,821,380 to 5,822,018
_5098
PP_5099: PP_5099 - conserved protein of unknown function, at 5,822,041 to 5,822,475
_5099
Group
Condition
PP
_5095
PP
_5096
PP
_5097
PP
_5098
PP
_5099
nitrogen source
Propandiamine (N)
-3.8
-5.0
-5.6
-5.0
-0.1
carbon source
1,2-Propanediol (C)
-4.6
-0.5
-6.7
-7.4
+0.1
carbon source
4-Hydroxybenzoic Acid (C)
-4.5
-0.6
-6.6
-6.8
-0.2
carbon source
1,2-Propanediol (C)
-4.7
+0.0
-7.1
-6.9
+0.0
carbon source
1,3-Hexanediol (C)
-7.1
-0.3
-5.6
-5.3
-0.2
carbon source
L-Lysine (C)
-4.4
-0.0
-7.1
-6.9
-0.0
nitrogen source
Propandiamine (N)
-3.9
-4.2
-5.1
-5.1
-0.2
carbon source
Vanillin (C)
-4.5
-0.3
-6.9
-6.6
-0.2
carbon source
L-Glutamic (C)
-4.4
-0.3
-6.4
-7.2
+0.0
carbon source
L-Lysine (C)
-4.6
+0.0
-6.7
-6.8
-0.2
carbon source
benzoic (C)
-4.7
-0.5
-6.9
-5.8
-0.3
carbon source
L-Glutamic (C)
-4.4
-0.2
-6.3
-6.9
-0.1
carbon source
p-Coumaric (C)
-4.6
-0.3
-7.1
-6.1
+0.0
carbon source
Phenylacetic (C)
-4.4
-0.4
-6.8
-6.6
+0.1
carbon source
Ferulic Acid (C)
-4.3
+0.0
-6.7
-6.8
-0.1
carbon source
p-Coumaric (C)
-4.4
-0.2
-6.1
-7.2
-0.1
carbon source
Vanillin (C)
-4.4
-0.2
-6.9
-6.2
-0.1
carbon source
Beta-alanine (C)
-4.7
-0.1
-5.9
-6.9
-0.3
carbon source
Hydroxy-L-Proline (C)
-4.7
-0.2
-6.8
-6.3
+0.1
stress
MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM
-5.3
+0.1
-6.1
-6.2
-0.2
carbon source
Vanillic Acid (C)
-4.6
-0.1
-6.7
-6.0
-0.2
carbon source
Delta-Undecalactone (C)
-4.5
-0.2
-6.2
-6.2
-0.5
carbon source
Delta-Undecalactone (C)
-4.3
-0.5
-6.6
-6.1
-0.1
carbon source
Ferulic Acid (C)
-4.5
-0.2
-7.2
-5.7
+0.1
carbon source
Protocatechuic Acid (C)
-4.5
-0.1
-6.8
-6.0
-0.1
carbon source
Vanillic Acid (C)
-4.6
+0.0
-6.6
-6.4
+0.2
nitrogen source
spermidine (N)
-3.7
-5.1
-4.3
-4.2
+0.2
carbon source
DL-3-Hydroxyisobutyric (C)
-6.0
+0.1
-5.7
-5.5
+0.1
carbon source
Glycerol (C)
-4.5
+0.1
-6.4
-6.4
+0.1
carbon source
DL-3-Hydroxybutyric (C)
-5.5
+0.2
-5.8
-5.6
+0.1
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