Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_5056 and PP_5057 are separated by 140 nucleotidesPP_5057 and PP_5058 are separated by 78 nucleotidesPP_5058 and PP_5059 are separated by 8 nucleotidesPP_5059 and PP_5060 are separated by 43 nucleotides PP_5056: PP_5056 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 5,760,949 to 5,762,484 _5056 PP_5057: PP_5057 - Peptidase, M23/M37 family, at 5,762,625 to 5,763,941 _5057 PP_5058: PP_5058 - Carboxy-terminal-processing protease, at 5,764,020 to 5,765,336 _5058 PP_5059: PP_5059 - conserved exported protein of unknown function, at 5,765,345 to 5,766,112 _5059 PP_5060: PP_5060 - conserved protein of unknown function, at 5,766,156 to 5,770,871 _5060
Group Condition PP_5056 PP_5057 PP_5058 PP_5059 PP_5060
carbon source 3-methyl-1-butanol 0.1 vol% (C) N.D. -0.9 -3.5 -0.2 +0.1
carbon source 3-methyl-1-butanol 0.25 vol% (C) N.D. -0.7 -3.4 -0.5 +0.3
nitrogen source DL-2-Aminobutyric (N) N.D. -0.5 -3.7 -0.1 -0.0
nitrogen source Urea (N); with MOPS N.D. -0.4 -3.7 -0.1 +0.0
phage P. putida PUT10 MOI 1 N.D. -0.1 -4.4 +0.3 +0.0
pH Growth at pH7 and (C) Trisodium citrate N.D. -0.2 -4.0 -0.2 +0.3
phage P. putida PUT10 MOI 10 N.D. +0.2 -4.4 +0.3 -0.1
phage P. putida South MOI 0.1 N.D. -0.3 -3.7 +0.0 -0.1
phage P. put PUT 10 MOI 1 N.D. -0.1 -3.6 -0.2 -0.1
phage P. put PUT 10 MOI 10 N.D. -0.0 -3.9 +0.2 -0.2
nitrogen source DL-2-Aminobutyric (N) N.D. -0.6 -3.0 -0.5 +0.2
phage P. putida PUT10 MOI 1 N.D. +0.0 -3.7 -0.2 +0.0
phage P. put PUT 10 MOI 10 N.D. +0.1 -3.6 -0.2 -0.1
phage P. put South MOI 1 N.D. +0.1 -3.8 +0.1 -0.1
phage P. put South MOI 0.1 N.D. -0.1 -3.7 +0.2 +0.0
phage P. putida PUT10 MOI 10 N.D. +0.2 -3.6 -0.2 -0.0
phage P. put PUT 10 MOI 0.1 N.D. -0.0 -3.4 -0.0 -0.0
micoeukaryotes Tetrahymena sp., Mixed culture-1 N.D. -0.4 -2.9 -0.0 -0.1
phage P. put PUT 10 MOI 0.1 N.D. +0.1 -3.2 -0.1 -0.1
phage PUT 8 MOI 1 N.D. +0.2 -3.6 +0.2 -0.1
carbon source ferulate (C); with MOPS N.D. +0.2 -2.6 -1.0 +0.1
phage P. put South MOI 1 N.D. -0.0 -3.2 +0.1 -0.2
micoeukaryotes Tetrahymena sp., Mixed culture-2 N.D. -0.4 -3.0 +0.4 -0.1
carbon source Delta-Nonalactone (C) N.D. -3.4 +0.3 -0.1 +0.1
phage P. putida PUT10 MOI 0.1 N.D. -0.2 -2.7 +0.2 -0.1
phage P. putida South MOI 0.1 N.D. +0.1 -3.0 +0.4 -0.2
phage P. put PUT 10 MOI 1 N.D. -0.0 -2.9 +0.2 -0.0
phage PUT8 MOI 0.1 N.D. +0.3 -3.0 +0.2 -0.1
micoeukaryotes Dictyostellum sp.mixed culture-1 N.D. +0.2 -2.5 +0.3 +0.1
carbon source L-Lysine 10 mM (C) N.D. -0.0 +3.1 -0.0 -0.0
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