Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_5014 and PP_5015 are separated by 1 nucleotidesPP_5015 and PP_5016 are separated by 81 nucleotidesPP_5016 and PP_5017 are separated by 3 nucleotidesPP_5017 and PP_5018 overlap by 4 nucleotides PP_5014: PP_5014 - Phosphoribosyl-AMP cyclohydrolase, at 5,714,247 to 5,714,639 _5014 PP_5015: PP_5015 - phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data), at 5,714,641 to 5,714,976 _5015 PP_5016: PP_5016 - twin arginine protein export complex subunit, at 5,715,058 to 5,715,330 _5016 PP_5017: PP_5017 - Sec-independent protein translocase protein TatB, at 5,715,334 to 5,715,711 _5017 PP_5018: PP_5018 - sec-independent protein translocase protein, at 5,715,708 to 5,716,496 _5018
Group Condition PP_5014 PP_5015 PP_5016 PP_5017 PP_5018
carbon source Tween 20 (C) -3.8 -6.1 N.D. -5.1 N.D.
carbon source Protocatechuic Acid (C) -5.1 -6.9 N.D. -1.4 N.D.
carbon source Beta-alanine (C) -5.8 -7.1 N.D. -0.3 N.D.
carbon source 1,2-Propanediol (C) -6.6 -6.3 N.D. -0.1 N.D.
carbon source Beta-alanine (C) -6.4 -5.2 N.D. -1.3 N.D.
carbon source Hydroxy-L-Proline (C) -5.2 -7.0 N.D. -0.5 N.D.
carbon source benzoic (C) -6.6 -6.3 N.D. +0.1 N.D.
nitrogen source nitrogen source Ammonium chloride 20mM -6.5 -6.3 N.D. +0.1 N.D.
carbon source Protocatechuic Acid (C) -5.5 -6.9 N.D. -0.1 N.D.
carbon source D-Fructose (C) -4.4 -5.8 N.D. -2.4 N.D.
carbon source p-Coumaric (C) -6.3 -6.0 N.D. -0.2 N.D.
carbon source Phenylacetic (C) -6.4 -6.1 N.D. +0.0 N.D.
temperature shift Temperature shift 30_to_25; with MOPS -4.5 -3.3 N.D. -4.7 N.D.
carbon source 4-Methyl-2-oxopentanoic (C) -6.7 -6.4 N.D. +0.6 N.D.
carbon source D-Glucose (C) -6.6 -5.7 N.D. -0.1 N.D.
carbon source Delta-Dodecalactone (C) -5.9 -5.6 N.D. -0.9 N.D.
nitrogen source 4-aminobutyric (N) -6.7 -5.6 N.D. -0.0 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -6.5 -6.2 N.D. +0.4 N.D.
carbon source Vanillic Acid (C) -5.0 -7.1 N.D. -0.2 N.D.
carbon source Delta-Undecalactone (C) -5.5 -6.0 N.D. -0.8 N.D.
carbon source L-Glutamic (C) -5.6 -7.0 N.D. +0.4 N.D.
carbon source benzoic (C) -6.6 -5.9 N.D. +0.5 N.D.
carbon source Delta-Undecalactone (C) -5.6 -6.9 N.D. +0.7 N.D.
carbon source Protocatechuic Acid (C) -5.4 -6.8 N.D. +0.5 N.D.
carbon source p-Coumaric (C) -5.9 -6.2 N.D. +0.4 N.D.
carbon source Levulinic Acid (C) -5.8 -6.2 N.D. +0.4 N.D.
carbon source 4-Methyl-2-oxopentanoic (C) -6.6 -5.3 N.D. +0.3 N.D.
carbon source Hydroxy-L-Proline (C) -5.2 -6.4 N.D. +0.7 N.D.
carbon source Ferulic Acid (C) -6.5 -5.0 N.D. +0.8 N.D.
carbon source 3-methyl-1-butanol 0.1 vol% (C) -4.5 -6.2 N.D. +1.5 N.D.
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