Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_4906 and PP_4907 are separated by 44 nucleotidesPP_4907 and PP_4908 are separated by 9 nucleotidesPP_4908 and PP_4909 are separated by 75 nucleotidesPP_4909 and PP_4910 are separated by 101 nucleotides PP_4906: PP_4906 - conserved protein of unknown function, at 5,576,279 to 5,577,814 _4906 PP_4907: PP_4907 - Thiosulfate sulfurtransferase, at 5,577,859 to 5,578,668 _4907 PP_4908: PP_4908 - phosphatidylserine decarboxylase, at 5,578,678 to 5,579,541 _4908 PP_4909: PP_4909 - phosphoserine phosphatase, at 5,579,617 to 5,580,864 _4909 PP_4910: PP_4910 - conserved protein of unknown function, at 5,580,966 to 5,582,423 _4910
Group Condition PP_4906 PP_4907 PP_4908 PP_4909 PP_4910
carbon source Protocatechuic Acid (C) -0.1 -0.3 N.D. -6.7 -2.5
carbon source Delta-Decalactone (C) -0.1 +0.2 N.D. -4.4 -4.6
nitrogen source DL-2-Aminobutyric (N) -0.2 +0.6 N.D. -5.2 -3.9
carbon source Ferulic Acid (C) -0.2 -0.0 N.D. -6.3 -2.3
carbon source L-Glutamic (C) -0.2 -0.4 N.D. -6.4 -1.7
carbon source DL-3-Hydroxyisobutyric (C) -0.1 -0.5 N.D. -5.8 -2.0
nitrogen source L-Glutamine (N) -0.1 +0.1 N.D. -6.9 -1.5
carbon source Crotonic (C) -0.0 -0.5 N.D. -4.7 -3.2
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.3 +0.2 N.D. -5.9 -2.4
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL -0.1 +0.0 N.D. -6.0 -2.2
carbon source benzoic (C) -0.1 +0.1 N.D. -6.0 -2.1
nitrogen source L-Asparagine (N) -0.1 +0.0 N.D. -6.0 -2.0
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.4 -1.2 N.D. -6.0 -0.4
carbon source 4-Hydroxybenzoic Acid (C) -0.1 +0.2 N.D. -6.4 -1.7
nitrogen source D-Alanine (N) -0.0 -0.1 N.D. -6.6 -1.2
stress MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL -0.1 +0.2 N.D. -5.8 -2.2
carbon source Vanillic Acid (C) -0.1 +0.1 N.D. -5.8 -2.0
nitrogen source Beta-alanine (N) -0.2 -0.0 N.D. -7.1 -0.6
micoeukaryotes C.elegans, mixed culture-1 -0.3 -0.3 N.D. -3.2 -4.1
nitrogen source L-Glutamine (N) -0.1 -0.0 N.D. -5.9 -1.8
carbon source L-Isoleucine (C) -0.1 -0.2 N.D. -6.0 -1.5
nitrogen source nitrite (N) -0.1 +0.2 N.D. -6.4 -1.4
nitrogen source D-Lysine (N) -0.1 -0.0 N.D. -6.5 -1.1
nitrogen source L-Proline (N) -0.1 +0.2 N.D. -6.5 -1.2
carbon source 4-Methyl-2-oxopentanoic (C) -0.1 +0.2 N.D. -5.2 -2.1
stress MOPS minimal media_Glucose20mM with Lithium chloride 200 mM -0.3 +0.2 N.D. -5.8 -1.3
nitrogen source Putrescine (N) -0.2 +0.2 N.D. -5.5 -1.7
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.1 +0.6 N.D. -6.0 -1.6
nitrogen source DL-2-Aminobutyric (N) -0.2 +0.7 N.D. -5.3 -2.3
carbon source L-Lysine (C) -0.2 +0.1 N.D. -7.0 +0.5
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