Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_4874 and PP_4875 are separated by 20 nucleotidesPP_4875 and PP_4876 are separated by 33 nucleotidesPP_4876 and PP_4877 are separated by 28 nucleotidesPP_4877 and PP_4879 are separated by 876 nucleotides PP_4874: PP_4874 - 50S ribosomal protein L9, at 5,542,812 to 5,543,258 _4874 PP_4875: PP_4875 - conserved membrane protein of unknown function, at 5,543,279 to 5,544,142 _4875 PP_4876: PP_4876 - 30S ribosomal protein S18, at 5,544,176 to 5,544,406 _4876 PP_4877: PP_4877 - 30S ribosomal protein S6, at 5,544,435 to 5,544,860 _4877 PP_4879: PP_4879 - 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB, at 5,545,737 to 5,546,483 _4879
Group Condition PP_4874 PP_4875 PP_4876 PP_4877 PP_4879
micoeukaryotes Tetrahymena sp., Mixed culture-2 -5.5 -1.6 N.D. N.D. -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.0 -3.7 N.D. N.D. -1.6
phage P. put South MOI 1 -5.4 -1.0 N.D. N.D. -0.6
phage PUT 8 MOI 1 -5.0 -1.6 N.D. N.D. -0.4
phage P. put PUT 10 MOI 1 -5.5 -0.8 N.D. N.D. -0.6
phage P. putida PUT10 MOI 0.1 -5.5 -0.6 N.D. N.D. -0.7
phage P. putida South MOI 0.1 -5.7 -1.0 N.D. N.D. -0.1
phage P. put PUT 10 MOI 1 -5.2 -0.6 N.D. N.D. -0.9
phage P. putida South MOI 10 -5.3 -0.7 N.D. N.D. -0.6
phage P. put South MOI 1 -5.5 -0.6 N.D. N.D. -0.5
phage P. put PUT 10 MOI 0.1 -5.3 -0.8 N.D. N.D. -0.4
phage P. putida South MOI 0.1 -5.6 -0.4 N.D. N.D. -0.5
phage PUT8 MOI 0.1 -4.9 -1.3 N.D. N.D. -0.2
micoeukaryotes C.elegans, mixed culture-1 -4.6 -1.2 N.D. N.D. -0.6
phage P. putida South MOI 10 -5.3 -0.9 N.D. N.D. -0.2
phage PUT8 MOI 10 -5.1 -0.7 N.D. N.D. -0.5
phage P. putida PUT10 MOI 1 -4.6 -1.0 N.D. N.D. -0.6
phage P. putida PUT10 MOI 10 -5.6 -0.0 N.D. N.D. -0.4
phage P. putida PUT10 MOI 10 -5.7 -0.2 N.D. N.D. -0.2
phage P. put South MOI 0.1 -5.3 -0.6 N.D. N.D. -0.2
phage P. put PUT 10 MOI 10 -5.5 -0.1 N.D. N.D. -0.4
micoeukaryotes Tetrahymena sp., Mixed culture-1 -4.1 -0.6 N.D. N.D. -1.2
micoeukaryotes C.elegans, mixed culture-2 -4.6 -0.6 N.D. N.D. -0.8
phage P. put PUT 10 MOI 0.1 -4.8 -1.1 N.D. N.D. +0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.5 -1.1 N.D. N.D. -1.1
phage P. put South MOI 10 -5.4 -0.1 N.D. N.D. -0.2
stress R2A with Fusaric 240 ug/mL -5.5 +0.2 N.D. N.D. -0.3
phage PUT8 MOI 10 -5.0 -0.3 N.D. N.D. -0.3
micoeukaryotes Acanthamoeba sp., muxed culture-2 -3.9 -0.5 N.D. N.D. -1.1
phage PUT8 MOI 0.1 -5.0 -0.2 N.D. N.D. -0.2
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