Fitness for 5 genes in Pseudomonas putida KT2440

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions or try the comparative fitness browser

500 ntPP_4858 and PP_4859 are separated by 122 nucleotidesPP_4859 and PP_4860 are separated by 19 nucleotidesPP_4860 and PP_4861 are separated by 102 nucleotidesPP_4861 and PP_4862 are separated by 49 nucleotides PP_4858: PP_4858 - conserved exported protein of unknown function, at 5,525,213 to 5,525,710 _4858 PP_4859: PP_4859 - Transcriptional regulator, TetR family, at 5,525,833 to 5,526,468 _4859 PP_4860: PP_4860 - putative Mannose-6-phosphate isomerase, at 5,526,488 to 5,527,621 _4860 PP_4861: PP_4861 - conserved protein of unknown function, at 5,527,724 to 5,527,972 _4861 PP_4862: PP_4862 - 3-hydroxy acid dehydrogenase, NADP-dependent / malonic semialdehyde reductase, at 5,528,022 to 5,528,786 _4862
Group Condition PP_4858 PP_4859 PP_4860 PP_4861 PP_4862
stress R2A with Fusaric 480 ug/mL N.D. -0.7 -4.2 +0.1 +0.0
stress R2A with Fusaric 480 ug/mL N.D. -0.8 -3.7 -0.3 +0.0
stress R2A with Fusaric 480 ug/mL N.D. -1.1 -3.4 -0.0 -0.0
stress R2A with Fusaric 480 ug/mL N.D. -0.6 -3.8 +0.2 -0.0
stress R2A with Fusaric 480 ug/mL N.D. -0.5 -3.3 -0.0 -0.0
stress R2A with Fusaric 480 ug/mL N.D. -0.3 -2.8 +0.2 -0.1
carbon source ferulate (C); with MOPS N.D. -1.0 -1.5 -0.4 +0.3
carbon source ferulate (C); with MOPS N.D. -0.2 -1.7 -0.1 -0.3
pH Growth at pH7 and (C) Trisodium citrate N.D. -1.1 -0.7 -0.6 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -1.8 -0.5 -0.2 +0.3
pH Growth at pH6 and (C) Trisodium citrate N.D. -0.5 -0.8 -0.7 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. -0.7 -0.7 -0.6 -0.2
carbon source ferulate (C); with MOPS N.D. +0.5 -2.0 -0.5 -0.1
pH Growth at pH6 and (C) Trisodium citrate N.D. +0.2 -0.8 -1.2 -0.3
pH Growth at pH6 and (C) Trisodium citrate N.D. -1.3 -1.2 +0.3 +0.1
nitrogen source D-2-Aminobutyric (N) N.D. +1.0 -0.3 -1.1 -0.6
phage P. put PUT 10 MOI 10 N.D. +1.4 +0.3 -1.1 -0.0
phage P. put South MOI 0.1 N.D. +1.1 +0.8 -0.5 -0.0
phage P. putida PUT10 MOI 0.1 N.D. +1.3 +0.6 -0.6 +0.1
phage P. putida South MOI 0.1 N.D. +0.9 +0.9 -0.3 -0.1
phage PUT8 MOI 0.1 N.D. +1.3 +0.8 -0.4 -0.1
phage P. put South MOI 1 N.D. +1.5 +0.7 -0.5 -0.0
phage P. putida South MOI 0.1 N.D. +1.1 +0.8 +0.1 -0.2
phage P. putida South MOI 1 N.D. +1.5 +0.6 -0.1 -0.1
phage PUT8 MOI 0.1 N.D. +1.6 +1.0 -0.2 -0.2
phage P. putida PUT10 MOI 0.1 N.D. +1.5 +0.7 -0.1 +0.1
phage P. putida PUT10 MOI 1 N.D. +1.2 +0.8 +0.2 -0.0
phage P. putida PUT10 MOI 10 N.D. +1.6 +0.5 +0.1 +0.0
phage PUT 8 MOI 1 N.D. +1.2 +0.7 +0.0 +0.4
phage P. put South MOI 1 N.D. +1.3 +0.8 +0.2 +0.1
remove
PP_4858
plot		 remove
PP_4859
plot		 remove
PP_4860		 remove
PP_4861
plot		 remove
PP_4862
plot