Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_4797 and PP_4798 are separated by 60 nucleotidesPP_4798 and PP_4799 are separated by 33 nucleotidesPP_4799 and PP_4800 are separated by 98 nucleotidesPP_4800 and PP_4801 are separated by 2 nucleotides PP_4797: PP_4797 - conserved protein of unknown function, at 5,460,836 to 5,461,000 _4797 PP_4798: PP_4798 - putative Membrane-bound lytic murein transglycosylase, at 5,461,061 to 5,462,377 _4798 PP_4799: PP_4799 - putative Muramoyltetrapeptide carboxypeptidase, at 5,462,411 to 5,463,349 _4799 PP_4800: PP_4800 - Lipoyl synthase, at 5,463,448 to 5,464,464 _4800 PP_4801: PP_4801 - Octanoyltransferase, at 5,464,467 to 5,465,117 _4801
Group Condition PP_4797 PP_4798 PP_4799 PP_4800 PP_4801
nitrogen source Propandiamine (N) -3.5 -0.4 -3.2 N.D. N.D.
stress R2A with Fusaric 240 ug/mL -1.2 -0.2 -5.2 N.D. N.D.
stress R2A with Fusaric 480 ug/mL -0.3 -0.8 -5.1 N.D. N.D.
stress R2A with Fusaric 240 ug/mL -0.8 -0.3 -5.0 N.D. N.D.
stress R2A with Fusaric 120 ug/mL -0.9 -0.0 -5.2 N.D. N.D.
stress R2A with Fusaric 480 ug/mL -0.2 -0.8 -5.1 N.D. N.D.
nitrogen source nitrogen source Ammonium chloride 20mM -0.6 +0.1 -5.5 N.D. N.D.
carbon source Levulinic Acid (C) -0.2 -0.3 -5.5 N.D. N.D.
stress R2A with Fusaric 480 ug/mL +0.1 -0.8 -5.2 N.D. N.D.
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.9 +0.2 -5.0 N.D. N.D.
stress R2A with Fusaric 480 ug/mL +0.0 -0.7 -5.1 N.D. N.D.
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.2 -0.2 -5.3 N.D. N.D.
nitrogen source nitrogen source nitrate 20mM -0.3 -0.1 -5.4 N.D. N.D.
stress R2A with Fusaric 480 ug/mL +0.3 -0.6 -5.2 N.D. N.D.
r2a control R2A control +0.1 -0.5 -5.2 N.D. N.D.
carbon source D-Glucose (C) +0.3 -0.3 -5.5 N.D. N.D.
carbon source p-Coumaric (C) +0.2 -0.4 -5.3 N.D. N.D.
carbon source D-Glucose (C) +0.3 -0.2 -5.5 N.D. N.D.
carbon source Levulinic Acid (C) +0.4 -0.4 -5.3 N.D. N.D.
carbon source Levulinic Acid (C) +0.4 -0.3 -5.3 N.D. N.D.
r2a control R2A control +0.3 -0.3 -5.1 N.D. N.D.
nitrogen source nitrogen source nitrate 20mM +0.1 +0.3 -5.4 N.D. N.D.
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.6 -0.3 -5.4 N.D. N.D.
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.4 -0.2 -5.1 N.D. N.D.
carbon source Vanillin (C) +0.3 +0.3 -5.4 N.D. N.D.
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.6 -0.2 -5.2 N.D. N.D.
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.7 -0.1 -5.1 N.D. N.D.
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.7 -0.1 -4.9 N.D. N.D.
stress R2A with Fusaric 240 ug/mL +0.7 -0.1 -4.9 N.D. N.D.
carbon source Acetate Carbon Source (20mM) +0.6 +0.4 -4.7 N.D. N.D.
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