Fitness for 5 genes in Pseudomonas putida KT2440

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions or try the comparative fitness browser

500 ntPP_4779 and PP_4780 are separated by 105 nucleotidesPP_4780 and PP_4781 are separated by 207 nucleotidesPP_4781 and PP_4782 are separated by 265 nucleotidesPP_4782 and PP_4783 are separated by 13 nucleotides PP_4779: PP_4779 - AMP nucleosidase, at 5,439,362 to 5,440,825 _4779 PP_4780: PP_4780 - putative Acyl-CoA dehydrogenase, at 5,440,931 to 5,442,583 _4780 PP_4781: PP_4781 - Sensor histidine kinase, at 5,442,791 to 5,444,779 _4781 PP_4782: PP_4782 - Phosphomethylpyrimidine kinase, at 5,445,045 to 5,445,842 _4782 PP_4783: PP_4783 - Thiamine-phosphate synthase, at 5,445,856 to 5,446,479 _4783
Group Condition PP_4779 PP_4780 PP_4781 PP_4782 PP_4783
nitrogen source DL-2-Aminobutyric (N) -3.5 -0.0 -0.2 -3.6 N.D.
nitrogen source DL-2-Aminobutyric (N) -3.8 +0.2 -0.1 -3.0 N.D.
carbon source 4-Methyl-2-oxopentanoic (C) -0.1 -0.2 -0.1 -6.1 N.D.
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.0 -0.1 -0.1 -5.3 N.D.
temperature shift Temperature shift 30_to_25; with MOPS +0.3 +0.3 +0.0 -6.0 N.D.
carbon source Delta-Decalactone (C) -0.2 -0.1 -0.2 -4.8 N.D.
carbon source Delta-Undecalactone (C) -2.2 -0.1 -0.0 -2.9 N.D.
temperature shift Temperature shift 30_to_25 +0.0 +0.1 -0.2 -5.1 N.D.
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.3 -0.2 -0.2 -5.0 N.D.
nitrogen source Propandiamine (N) -0.1 -0.2 -0.1 -4.6 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM +0.1 +0.0 -0.1 -5.0 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.0 +0.3 -0.1 -4.9 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.1 -0.0 -0.1 -4.6 N.D.
carbon source Protocatechuic Acid (C) -0.1 -0.1 -0.0 -4.5 N.D.
nitrogen source D-2-Aminobutyric (N) -0.5 +0.6 -0.4 -4.4 N.D.
pH D-Glucose (C) pH 6 +0.2 -0.1 -0.1 -4.6 N.D.
carbon source gluconate (C) +0.1 +0.2 +0.0 -4.8 N.D.
nitrogen source D-2-Aminobutyric (N) -0.7 -0.2 +0.2 -3.8 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.1 +0.1 +0.0 -4.5 N.D.
carbon source 2,3-Butanediol (C) -0.5 +0.2 +0.2 -4.3 N.D.
nitrogen source Propandiamine (N) +0.0 +0.2 -0.1 -4.5 N.D.
carbon source Delta-Undecalactone (C) -1.4 +0.1 +0.1 -3.1 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.2 -0.1 -0.2 -4.1 N.D.
carbon source L-tyrosine 5 mM (C) +0.3 -0.2 -0.0 -4.1 N.D.
stress Growth with Chloride 500 mM; with MOPS +0.2 +0.2 +0.0 -4.4 N.D.
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.3 -0.2 -0.2 -3.8 N.D.
carbon source D-Glucaric (C) +0.1 +0.3 +0.0 -4.3 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.3 +0.2 +0.0 -4.1 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.3 +0.2 +0.0 -4.0 N.D.
carbon source 3-methyl-1-butanol (C) +1.4 +0.2 +0.1 -2.9 N.D.
remove
PP_4779
plot		 remove
PP_4780
plot		 remove
PP_4781		 remove
PP_4782
plot		 remove
PP_4783
plot