Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_4711 and PP_4712 are separated by 116 nucleotidesPP_4712 and PP_4713 are separated by 27 nucleotidesPP_4713 and PP_4714 are separated by 59 nucleotidesPP_4714 and PP_t49 are separated by 78 nucleotides PP_4711: PP_4711 - Ribosome-binding factor A, at 5,355,705 to 5,356,103 _4711 PP_4712: PP_4712 - Translation initiation factor IF-2, at 5,356,220 to 5,358,760 _4712 PP_4713: PP_4713 - transcription termination/antitermination L factor, at 5,358,788 to 5,360,269 _4713 PP_4714: PP_4714 - ribosome maturation factor, at 5,360,329 to 5,360,838 _4714 PP_t49: PP_t49 - tRNA-Met, at 5,360,917 to 5,360,993 _t49
Group Condition PP_4711 PP_4712 PP_4713 PP_4714 PP_t49
phage P. putida South MOI 10 N.D. N.D. N.D. N.D. -3.6
temperature shift Temperature shift 30_to_4 N.D. N.D. N.D. N.D. -3.0
phage P. put PUT 10 MOI 10 N.D. N.D. N.D. N.D. -3.0
phage P. putida PUT10 MOI 10 N.D. N.D. N.D. N.D. -2.9
temperature shift Temperature shift 30_to_4 N.D. N.D. N.D. N.D. -2.7
phage PUT8 MOI 0.1 N.D. N.D. N.D. N.D. -2.6
temperature shift Temperature shift 30_to_4 N.D. N.D. N.D. N.D. -2.5
phage P. put South MOI 1 N.D. N.D. N.D. N.D. -2.5
phage P. putida South MOI 1 N.D. N.D. N.D. N.D. -2.5
phage P. putida South MOI 10 N.D. N.D. N.D. N.D. -2.4
stress Geraniol 1 vol% N.D. N.D. N.D. N.D. -2.4
phage P. put PUT 10 MOI 10 N.D. N.D. N.D. N.D. -2.4
phage P. put South MOI 1 N.D. N.D. N.D. N.D. -2.4
phage P. putida PUT10 MOI 1 N.D. N.D. N.D. N.D. -2.4
phage P. putida PUT10 MOI 10 N.D. N.D. N.D. N.D. -2.2
phage P. put South MOI 0.1 N.D. N.D. N.D. N.D. -2.1
temperature shift Temperature shift 30_to_4; with MOPS N.D. N.D. N.D. N.D. -2.1
phage PUT8 MOI 0.1 N.D. N.D. N.D. N.D. -2.0
phage P. put PUT 10 MOI 1 N.D. N.D. N.D. N.D. -2.0
nitrogen source DL-2-Aminobutyric (N) N.D. N.D. N.D. N.D. -2.0
phage P. put South MOI 10 N.D. N.D. N.D. N.D. -1.9
phage P. putida South MOI 0.1 N.D. N.D. N.D. N.D. -1.9
temperature shift Temperature shift 30_to_4; with MOPS N.D. N.D. N.D. N.D. -1.9
phage PUT 8 MOI 1 N.D. N.D. N.D. N.D. -1.8
phage P. putida South MOI 0.1 N.D. N.D. N.D. N.D. -1.7
carbon source Vanillin (C) N.D. N.D. N.D. N.D. -1.6
phage P. put South MOI 0.1 N.D. N.D. N.D. N.D. -1.6
carbon source Lignin Monomers (C) N.D. N.D. N.D. N.D. +1.7
carbon source Lignin Monomers (C) N.D. N.D. N.D. N.D. +1.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. +2.2
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