Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_4652 and PP_4653 are separated by 229 nucleotidesPP_4653 and PP_4654 overlap by 4 nucleotidesPP_4654 and PP_4655 are separated by 137 nucleotidesPP_4655 and PP_4656 are separated by 10 nucleotides PP_4652: PP_4652 - putative Membrane protein, at 5,277,040 to 5,278,260 _4652 PP_4653: PP_4653 - adenine:H+ symporter, at 5,278,490 to 5,279,785 _4653 PP_4654: PP_4654 - tRNA/tmRNA (uracil-C(5))-methyltransferase, at 5,279,782 to 5,280,867 _4654 PP_4655: PP_4655 - protocatechuate 3,4-dioxygenase alpha chain, at 5,281,005 to 5,281,610 _4655 PP_4656: PP_4656 - protocatechuate 3,4-dioxygenase beta chain, at 5,281,621 to 5,282,340 _4656
Group Condition PP_4652 PP_4653 PP_4654 PP_4655 PP_4656
carbon source Vanillin (C) -0.0 +0.0 +0.1 -6.4 -8.0
carbon source Protocatechuic Acid (C) -0.1 -0.2 -0.1 -6.3 -6.5
carbon source Protocatechuic Acid (C) -0.1 -0.2 +0.1 -5.9 -7.0
carbon source Vanillic Acid (C) +0.0 -0.1 +0.0 -5.1 -6.8
carbon source Protocatechuic Acid (C) -0.3 +0.0 +0.2 -5.6 -6.3
carbon source p-Coumaric (C) -0.2 -0.1 +0.0 -4.2 -6.8
carbon source Protocatechuic Acid (C) +0.3 -0.2 +0.1 -5.1 -6.4
carbon source Ferulic Acid (C) -0.0 +0.0 +0.1 -5.0 -6.1
carbon source p-Coumaric (C) -0.1 -0.0 -0.0 -4.9 -6.0
carbon source Vanillin (C) -0.1 -0.1 +0.1 -4.6 -5.4
carbon source Vanillin (C) +0.1 -0.2 +0.1 -4.4 -5.6
carbon source Vanillin (C) +0.1 +0.1 +0.2 -4.9 -5.4
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -0.1 +0.1 -5.2 -4.5
carbon source Ferulic Acid (C) +0.0 +0.2 +0.2 -4.9 -5.1
carbon source 4-Hydroxybenzoic Acid (C) +0.2 -0.1 +0.0 -3.9 -4.6
carbon source p-Coumaric (C) -0.1 +0.1 +0.2 -4.2 -4.2
carbon source Vanillic Acid (C) -0.1 +0.1 +0.1 -4.0 -3.9
carbon source ferulate (C); with MOPS +0.1 -0.1 +0.3 -3.2 -4.3
carbon source p-Coumaric (C) -0.0 -0.0 +0.2 -3.6 -3.5
carbon source ferulate (C); with MOPS -0.6 -0.1 +0.4 -4.2 -2.4
carbon source ferulate (C); with MOPS -0.5 -0.1 +0.6 -3.1 -3.2
carbon source Quinic Acid (C) +0.0 -0.3 -0.1 -3.0 -2.9
carbon source Quinic Acid (C) +0.2 -0.1 +0.3 -2.6 -2.8
carbon source Crotonic (C) +0.0 -0.3 -0.1 -2.2 -2.0
nitrogen source D-2-Aminobutyric (N) +0.5 -1.3 -2.8 -0.2 -0.4
carbon source Ferulic Acid (C) -0.2 +0.2 +0.3 -1.8 -2.5
nitrogen source DL-2-Aminobutyric (N) -0.2 -1.1 -2.5 -0.2 +0.1
nitrogen source DL-2-Aminobutyric (N) -0.3 -1.4 -2.2 +0.0 +0.0
carbon source p-Coumaric (C) -0.2 +0.2 +0.4 -1.8 -2.1
nitrogen source D-2-Aminobutyric (N) +0.0 -1.3 -2.3 -0.1 +0.5
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