Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_4495 and PP_4496 are separated by 638 nucleotidesPP_4496 and PP_4497 are separated by 265 nucleotidesPP_4497 and PP_4498 overlap by 14 nucleotidesPP_4498 and PP_4499 overlap by 37 nucleotides PP_4495: PP_4495 - aromatic amino acid transport protein, at 5,109,287 to 5,110,705 _4495 PP_4496: PP_4496 - 23S rRNA pseudouridine 2605 synthase, at 5,111,344 to 5,112,411 _4496 PP_4497: PP_4497 - conserved protein of unknown function, at 5,112,677 to 5,113,444 _4497 PP_4498: PP_4498 - Segregation and condensation protein A, at 5,113,431 to 5,114,318 _4498 PP_4499: PP_4499 - putative maturation enzyme, at 5,114,282 to 5,114,947 _4499
Group Condition PP_4495 PP_4496 PP_4497 PP_4498 PP_4499
pH Growth at pH7 and (C) Trisodium citrate -0.5 N.D. -0.0 -0.4 -2.3
phage PUT8 MOI 0.1 -1.0 N.D. -0.5 -0.5 -1.3
phage P. putida South MOI 0.1 -1.3 N.D. -0.4 -0.5 -0.9
phage P. put South MOI 1 -1.4 N.D. -0.9 -0.2 -0.6
phage P. put PUT 10 MOI 10 -1.2 N.D. -0.9 -0.2 -0.9
phage P. putida South MOI 1 -1.4 N.D. -0.7 -0.3 -0.7
phage P. putida PUT10 MOI 10 -1.4 N.D. -0.8 -0.1 -0.7
phage P. putida South MOI 0.1 -1.1 N.D. -0.6 -0.2 -1.1
phage P. putida PUT10 MOI 10 -1.2 N.D. -0.8 -0.4 -0.6
phage P. putida PUT10 MOI 1 -1.4 N.D. -0.3 -0.5 -0.7
phage P. put PUT 10 MOI 1 -1.1 N.D. -0.8 -0.5 -0.5
phage P. put South MOI 1 -1.2 N.D. -0.7 -0.5 -0.2
phage P. put PUT 10 MOI 1 -1.3 N.D. -0.6 -0.2 -0.6
phage P. putida PUT10 MOI 0.1 -1.1 N.D. -0.5 -0.4 -0.6
phage PUT8 MOI 0.1 -1.0 N.D. -0.3 -0.4 -0.9
phage P. putida PUT10 MOI 1 -1.2 N.D. -0.3 -0.5 -0.4
nitrogen source 2,6-diaminopimelic (N) -0.2 N.D. -1.0 -0.5 -0.8
phage P. put PUT 10 MOI 10 -1.2 N.D. -0.4 -0.3 -0.4
phage P. put South MOI 0.1 -1.0 N.D. -0.5 -0.3 -0.5
phage P. put PUT 10 MOI 0.1 -0.9 N.D. -0.5 -0.2 -0.7
carbon source L-Phenylalanine 5 mM (C) -2.5 N.D. -0.0 -0.1 +0.4
phage P. put PUT 10 MOI 0.1 -1.0 N.D. -0.4 -0.5 -0.3
temperature shift Temperature shift 30_to_4; with MOPS -0.2 N.D. -0.7 -0.3 -1.0
carbon source Delta-Decalactone (C) -0.1 N.D. -0.5 -0.6 -1.0
carbon source L-Phenylalanine 5 mM (C) -2.6 N.D. +0.4 -0.1 +0.3
temperature Growth at 30C; with MOPS +0.1 N.D. -0.3 -0.3 -1.5
nitrogen source 2,6-diaminopimelic (N) +0.1 N.D. -0.8 -0.4 -0.9
carbon source L-Phenylalanine 5 mM (C) -2.7 N.D. +0.2 +0.0 +0.5
carbon source 3-methyl-1-butanol 0.1 vol% (C) -2.3 N.D. +0.4 +0.0 +0.1
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.0 N.D. +1.0 +0.2 +1.7
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