Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_4400 and PP_4401 are separated by 198 nucleotidesPP_4401 and PP_4402 are separated by 40 nucleotidesPP_4402 and PP_4403 are separated by 0 nucleotidesPP_4403 and PP_4404 are separated by 2 nucleotides PP_4400: PP_4400 - Bkd operon transcriptional regulator, at 4,991,360 to 4,991,845 _4400 PP_4401: PP_4401 - branched-chain alpha-keto acid dehydrogenase complex, alpha subunit, at 4,992,044 to 4,993,276 _4401 PP_4402: PP_4402 - branched-chain alpha-keto acid dehydrogenase complex, beta subunit, at 4,993,317 to 4,994,336 _4402 PP_4403: PP_4403 - Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, at 4,994,337 to 4,995,608 _4403 PP_4404: PP_4404 - dihydrolipoyl dehydrogenase component of branched-chain alpha-keto acid dehydrogenase complex, at 4,995,611 to 4,996,990 _4404
Group Condition PP_4400 PP_4401 PP_4402 PP_4403 PP_4404
carbon source L-Isoleucine (C) -6.7 -6.7 -5.8 -6.5 -3.3
carbon source 4-Methyl-2-oxopentanoic (C) -7.8 -6.5 -5.7 -6.6 -2.1
carbon source L-Isoleucine (C) -7.3 -6.3 -5.3 -6.7 -2.7
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -5.8 -5.5 -5.0 -6.0 -3.7
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -4.6 -5.1 -4.4 -6.0 -4.1
nitrogen source D-2-Aminobutyric (N) -4.9 -4.7 -4.7 -5.0 -4.1
carbon source L-Valine (C) -6.2 -4.5 -4.0 -4.4 -4.2
carbon source 4-Methyl-2-oxopentanoic (C) -6.5 -4.9 -5.0 -4.4 -2.1
nitrogen source D-2-Aminobutyric (N) -5.8 -4.6 -3.8 -4.3 -4.1
carbon source L-Valine (C) -5.0 -4.5 -4.0 -3.8 -3.8
carbon source 4-Methyl-2-oxopentanoic (C) -6.0 -5.0 -5.5 -4.1 -0.4
carbon source 4-Methyl-2-oxopentanoic (C) -5.2 -5.0 -5.4 -4.8 -0.7
carbon source L-Valine (C) -3.7 -3.5 -3.6 -4.4 -3.9
carbon source L-Leucine (C) -4.2 -3.5 -3.8 -4.3 +0.7
carbon source L-Leucine (C) -3.1 -3.1 -3.0 -4.1 +0.7
micoeukaryotes Acanthamoeba sp., muxed culture-2 -2.3 -3.4 -1.7 -2.3 -1.1
carbon source 3-methyl-2-oxopentanoic (C) -2.4 -2.1 -2.0 -2.1 -1.2
carbon source 3-methyl-2-oxopentanoic (C) -1.9 -2.5 -1.8 -2.0 -1.2
nitrogen source DL-2-Aminobutyric (N) -1.4 -1.8 -1.7 -2.0 -0.9
nitrogen source DL-2-Aminobutyric (N) -1.3 -1.8 -1.4 -1.9 -0.8
nitrogen source L-Isoleucine (N) -1.6 -1.3 -1.2 -1.5 -0.8
nitrogen source L-Isoleucine (N) -1.4 -1.4 -1.2 -1.4 -0.8
nitrogen source L-Valine (N) -1.2 -1.3 -1.2 -1.2 -0.8
nitrogen source L-Valine (N) -1.1 -1.3 -1.1 -1.3 -0.9
nitrogen source L-Leucine (N) -1.2 -1.2 -1.2 -1.4 -0.1
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.9 -1.1 -1.1 -1.4 -0.4
nitrogen source L-Methionine (N) -1.0 -1.1 -1.1 -1.4 -0.3
nitrogen source L-Methionine (N) -1.0 -1.0 -1.0 -1.3 -0.2
carbon source L-Leucine (C) -1.4 -1.0 -0.9 -1.8 +1.6
micoeukaryotes C.elegans, mixed culture-1 -1.1 -1.2 -0.9 -0.7 +0.4
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