Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PP_4196	PP_4197	PP_4198	PP_4199	PP_4200
phage	P. putida Missley MOI 0.1	-0.9	-1.2	-1.1	-3.9	-0.2
phage	P. put South MOI 1	+0.3	+0.1	-1.4	-5.3	-0.1
nitrogen source	Ammonium chloride (N)	-0.4	-0.4	-0.5	-5.1	+0.0
phage	P. put South MOI 1	+0.6	+0.2	-1.9	-5.2	-0.0
nitrogen source	nitrogen source nitrite 1mM	-0.1	-0.1	-0.3	-5.5	-0.2
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.2	-4.4	-0.2	-1.9	+0.6
phage	P. putida South MOI 0.1	+0.6	+0.2	-1.8	-4.6	-0.3
phage	P. putida South MOI 0.1	+0.2	+0.3	-1.4	-4.5	-0.3
phage	P. putida PUT10 MOI 10	+0.6	+0.3	-3.0	-3.1	-0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.5	-5.3	+0.3	+0.0	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.4	-0.1	-0.0	-5.1	-0.3
temperature shift	Temperature shift 30_to_21; with MOPS	+0.1	-0.1	-0.2	-4.9	+0.2
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.8	-4.9	+0.0	+0.6	+0.2
temperature shift	Temperature shift 30_to_25; with MOPS	-2.6	-0.0	-0.5	-1.6	+0.0
carbon source	D-Glucose (C)	+0.1	+0.0	-0.1	-4.9	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.0	+0.0	+0.1	-2.4	-0.4
nitrogen source	NAG (N); with MOPS	+0.3	-0.2	+0.2	-5.0	+0.2
phage	P. put PUT 10 MOI 10	-0.3	+0.1	-2.7	-1.4	-0.1
temperature shift	Temperature shift 30_to_4; with MOPS	+0.7	-0.1	-0.2	-4.8	+0.1
phage	P. putida PUT10 MOI 1	+0.5	+0.2	-1.4	-3.2	-0.2
phage	P. putida PUT10 MOI 10	+0.7	+0.2	-2.6	-2.4	+0.0
phage	P. put PUT 10 MOI 1	-0.1	+0.2	-1.8	-2.2	-0.1
pH	Growth at pH7 and (C) Trisodium citrate	+0.8	+0.3	-0.4	-4.9	+0.3
carbon source	Valerolactone (C)	+0.4	-0.1	+0.1	-4.3	-0.0
carbon source	4-Methyl-2-oxopentanoic (C)	+1.3	+0.5	-0.5	-5.0	-0.2
carbon source	L-Phenylalanine 5 mM (C)	-0.4	-0.1	+0.2	-3.6	+0.2
carbon source	4-Aminobutyric 10 mM (C)	-3.4	+0.1	-0.0	+0.9	-0.0
phage	P. put PUT 10 MOI 10	+0.7	+0.3	-2.4	-1.1	+0.1
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+1.0	+0.5	-0.3	-2.5	-0.3
nitrogen source	D-2-Aminobutyric (N)	-1.8	-0.9	+0.8	+0.4	+0.7