Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4047	PP_4048	PP_4049	PP_4050	PP_4051
micoeukaryotes	C.elegans, mixed culture-1	+0.0	+0.0	+0.1	-2.5	-0.3
nitrogen source	D-2-Aminobutyric (N)	-0.6	-0.9	-0.3	-0.3	+0.5
temperature	Growth at 10C	+0.0	-0.1	-0.1	-1.3	-0.2
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.5	+0.2	+0.1	-2.0	-0.2
temperature	Growth at 10C; with MOPS	+0.0	+0.1	+0.1	-1.3	-0.2
micoeukaryotes	Dictyostellum sp.mixed culture-1	-0.1	+0.1	+0.1	-1.4	-0.0
stress	Growth with Chloride 500 mM	-0.2	+0.1	+0.1	-0.7	-0.5
phage	P. putida South MOI 10	-0.4	+0.3	-0.3	-0.3	-0.4
micoeukaryotes	Dictyostellum sp.mixed culture-2	+0.2	+0.2	+0.1	-1.3	-0.4
temperature	Growth at 25C	-0.2	+0.3	-0.3	-0.4	-0.6
stress	Growth with Chloride 500 mM	+0.1	+0.2	+0.1	-0.8	-0.6
micoeukaryotes	C.elegans, mixed culture-2	+0.4	+0.0	+0.2	-1.5	-0.1
temperature shift	Temperature shift 30_to_34; with MOPS	+0.2	-0.3	+0.2	-0.5	-0.6
stress	Growth with Chloride 500 mM	+0.4	+0.2	-0.0	-0.9	-0.4
stress	Growth with Chloride 500 mM; with MOPS	+0.4	+0.2	-0.1	-0.6	-0.5
temperature shift	Temperature shift 30_to_21; with MOPS	+0.6	+0.1	-0.1	-0.4	-0.5
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.5	-0.3	-0.2	+0.4	+0.6
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.1	+0.3	+0.2	-1.0	+0.5
nitrogen source	2,6-diaminopimelic (N)	-0.6	+0.2	-0.1	+0.2	+0.5
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.6	-0.2	+0.2	+0.5	+0.6
carbon source	ferulate (C); with MOPS	+0.8	+0.3	-0.3	+0.3	-0.6
nitrogen source	NAG (N); with MOPS	-0.2	+0.7	+0.4	-0.3	+0.2
carbon source	1,4-Butanediol (C)	-0.2	-0.2	-0.1	+1.3	+0.1
carbon source	Valerolactone (C)	-0.2	-0.2	-0.1	+0.3	+1.1
carbon source	L-Glutamic (C)	-0.3	-0.1	-0.0	+1.1	+0.4
carbon source	L-Valine (C)	-0.1	+0.0	-0.1	+1.1	+0.3
carbon source	4-Hydroxyvalerate (C) (40mM)	-0.2	+0.2	+0.0	+0.8	+0.5
carbon source	1,4-Butanediol (C)	-0.1	-0.0	-0.1	+1.3	+0.4
carbon source	4-Hydroxyvalerate (C) (40mM)	+0.1	+0.1	-0.0	+1.0	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.3	-0.1	+0.0	+0.4	+0.0