Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_3997 and PP_3998 are separated by 76 nucleotidesPP_3998 and PP_3999 are separated by 106 nucleotidesPP_3999 and PP_4000 are separated by 0 nucleotidesPP_4000 and PP_4001 are separated by 30 nucleotides PP_3997: PP_3997 - putative Glycosyl transferase, at 4,505,227 to 4,506,228 _3997 PP_3998: PP_3998 - glutathionyl-hydroquinone reductase, at 4,506,305 to 4,507,282 _3998 PP_3999: PP_3999 - Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase, at 4,507,389 to 4,508,780 _3999 PP_4000: PP_4000 - Serine--tRNA ligase, at 4,508,781 to 4,510,061 _4000 PP_4001: PP_4001 - Putative fluoride ion transporter CrcB, at 4,510,092 to 4,510,466 _4001
Group Condition PP_3997 PP_3998 PP_3999 PP_4000 PP_4001
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.1 +0.0 -4.8 N.D. -5.9
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.2 +0.0 -4.9 N.D. -5.5
nitrogen source nitrogen source Ammonium chloride 20mM -0.3 -0.3 -4.9 N.D. -0.5
nitrogen source nitrogen source Ammonium chloride 20mM -0.2 -0.1 -5.2 N.D. -0.3
carbon source Ferulic Acid (C) -0.2 +0.1 -5.3 N.D. -0.4
carbon source Glycerol (C) -0.2 -0.1 -4.8 N.D. -0.6
carbon source p-Coumaric (C) -0.1 -0.0 -5.5 N.D. -0.0
carbon source Vanillic Acid (C) -0.1 -0.0 -5.3 N.D. -0.2
pH Growth at pH6 and (C) D-Glucose -0.2 -0.0 -4.9 N.D. -0.4
carbon source Protocatechuic Acid (C) +0.1 -0.0 -5.3 N.D. -0.2
carbon source 1,4-Butanediol (C) -0.0 -0.0 -5.2 N.D. -0.3
carbon source 4-Methyl-2-oxopentanoic (C) -0.1 -0.0 -5.1 N.D. -0.2
carbon source Protocatechuic Acid (C) -0.0 +0.0 -5.1 N.D. -0.2
carbon source p-Coumaric (C) +0.1 -0.0 -4.9 N.D. -0.5
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.1 -4.9 N.D. -0.2
carbon source Phenylacetic (C) +0.0 +0.0 -5.1 N.D. -0.3
carbon source Vanillin (C) -0.0 -0.0 -4.9 N.D. -0.2
carbon source Glycerol (C) +0.1 +0.0 -5.0 N.D. -0.4
nitrogen source L-Ornithine (N) +0.1 -0.0 -5.1 N.D. -0.2
carbon source Phenylacetic (C) -0.1 +0.1 -5.0 N.D. -0.1
carbon source 3-Hydroxypropionate (C) -0.1 -0.0 -5.1 N.D. +0.1
carbon source D-Glucose (C) -0.1 +0.0 -5.0 N.D. -0.1
carbon source L-Lysine (C) -0.0 +0.1 -4.9 N.D. -0.3
pH Growth at pH6 and (C) Trisodium citrate -0.2 +0.1 -4.5 N.D. -0.5
carbon source Protocatechuic Acid (C) -0.1 +0.1 -4.7 N.D. -0.3
nitrogen source L-Arginine (N) +0.1 +0.0 -5.0 N.D. -0.1
carbon source Vanillic Acid (C) -0.1 +0.1 -5.0 N.D. +0.1
carbon source L-Lysine (C) +0.2 -0.0 -4.8 N.D. -0.3
carbon source Vanillin (C) +0.3 -0.1 -4.9 N.D. +0.0
carbon source Vanillin (C) +0.3 -0.0 -5.1 N.D. +0.2
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