Fitness for 5 genes in Pseudomonas putida KT2440

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions or try the comparative fitness browser

500 ntPP_3952 and PP_3953 are separated by 267 nucleotidesPP_3953 and PP_3954 are separated by 104 nucleotidesPP_3954 and PP_3955 are separated by 27 nucleotidesPP_3955 and PP_3956 overlap by 4 nucleotides PP_3952: PP_3952 - 3-oxoadipate CoA-transferase subunit A, at 4,458,067 to 4,458,708 _3952 PP_3953: PP_3953 - potassium transporter, at 4,458,976 to 4,460,430 _3953 PP_3954: PP_3954 - periplasmic binding subunit of unknown solute, at 4,460,535 to 4,461,485 _3954 PP_3955: PP_3955 - permease, at 4,461,513 to 4,463,540 _3955 PP_3956: PP_3956 - conserved protein of unknown function, at 4,463,537 to 4,463,953 _3956
Group Condition PP_3952 PP_3953 PP_3954 PP_3955 PP_3956
carbon source benzoic (C) -8.0 +0.0 -0.1 -0.0 -0.0
carbon source Vanillin (C) -8.2 +0.0 -0.0 +0.1 +0.3
carbon source Protocatechuic Acid (C) -7.7 +0.1 +0.1 +0.0 -0.1
carbon source p-Coumaric (C) -7.6 -0.1 +0.2 +0.0 +0.0
carbon source p-Coumaric (C) -7.3 -0.1 +0.1 +0.0 -0.2
carbon source Protocatechuic Acid (C) -7.4 +0.0 +0.2 -0.0 +0.2
carbon source p-Coumaric (C) -6.9 +0.0 +0.0 -0.0 -0.1
carbon source Protocatechuic Acid (C) -7.1 +0.0 +0.1 +0.1 +0.1
carbon source Protocatechuic Acid (C) -7.1 +0.1 -0.0 +0.1 +0.0
carbon source Ferulic Acid (C) -7.0 -0.2 +0.2 -0.0 +0.2
carbon source 4-Hydroxybenzoic Acid (C) -6.8 +0.0 +0.0 +0.0 -0.0
carbon source Ferulic Acid (C) -6.8 +0.1 -0.0 +0.1 +0.1
carbon source Vanillic Acid (C) -6.4 +0.0 -0.1 -0.1 +0.2
carbon source Vanillic Acid (C) -6.6 +0.1 +0.1 +0.0 +0.1
carbon source p-Coumaric (C) -5.8 +0.0 +0.0 -0.2 -0.2
carbon source benzoic (C) -6.0 +0.1 -0.1 +0.1 -0.0
carbon source 4-Hydroxybenzoic Acid (C) -5.8 -0.1 -0.1 +0.1 +0.1
carbon source 4-Hydroxybenzoic Acid (C) -6.1 +0.0 +0.1 +0.1 +0.0
carbon source Quinic Acid (C) -5.5 +0.0 -0.0 +0.0 -0.1
carbon source Vanillin (C) -5.2 -0.0 -0.1 -0.1 -0.0
carbon source Vanillin (C) -5.1 +0.0 -0.1 -0.1 +0.1
carbon source benzoic (C) -5.0 -0.1 +0.1 +0.0 +0.1
carbon source Quinic Acid (C) -5.0 +0.0 -0.1 +0.1 +0.1
carbon source Ferulic Acid (C) -4.5 -0.2 -0.0 -0.0 +0.1
carbon source Vanillin (C) -4.6 +0.2 -0.0 -0.0 -0.1
carbon source ferulate (C); with MOPS -3.7 -0.1 -0.3 -0.2 -0.1
carbon source L-Phenylalanine 5 mM (C) -3.4 -0.1 -0.1 -0.3 +0.1
carbon source L-Phenylalanine 5 mM (C) -3.6 -0.1 +0.1 -0.1 -0.0
carbon source ferulate (C); with MOPS -3.9 -0.2 +0.2 +0.1 +0.1
carbon source ferulate (C); with MOPS -3.4 +0.4 +0.1 -0.1 +0.5
remove
PP_3952
plot		 remove
PP_3953
plot		 remove
PP_3954		 remove
PP_3955
plot		 remove
PP_3956
plot