Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_3587 and PP_3588 are separated by 300 nucleotidesPP_3588 and PP_3589 are separated by 72 nucleotidesPP_3589 and PP_3590 are separated by 383 nucleotidesPP_3590 and PP_3591 are separated by 162 nucleotides PP_3587: PP_3587 - lipid hydroperoxide peroxidase, at 4,075,855 to 4,076,355 _3587 PP_3588: PP_3588 - Multidrug resistance transporter, Bcr/CflA family, at 4,076,656 to 4,077,843 _3588 PP_3589: PP_3589 - serine:H+ symport permease, threonine-insensitive, at 4,077,916 to 4,079,196 _3589 PP_3590: PP_3590 - aromatic-amino-acid transaminase (EC 2.6.1.57) (from data), at 4,079,580 to 4,080,776 _3590 PP_3591: PP_3591 - Delta 1-piperideine-2-carboxylate reductase, at 4,080,939 to 4,081,937 _3591
Group Condition PP_3587 PP_3588 PP_3589 PP_3590 PP_3591
carbon source D-Lysine 10 mM (C) +0.0 +0.0 -0.2 -1.3 -6.3
carbon source D-Lysine 10 mM (C) +0.1 -0.2 -0.2 -0.9 -6.1
carbon source L-Lysine (C) +0.2 -0.0 -0.1 -0.8 -6.7
carbon source L-Lysine (C) -0.4 +0.1 -0.2 -0.7 -6.0
carbon source L-Lysine 10 mM (C) -0.0 -0.0 -0.5 -0.1 -5.7
carbon source 3-methyl-1-butanol 0.1 vol% (C) -4.4 -0.1 -0.0 -1.1 -0.1
carbon source L-Lysine (C) -0.3 -0.0 -0.4 -0.5 -4.3
carbon source L-Phenylalanine 5 mM (C) -0.3 -0.0 -0.4 -4.7 +0.6
carbon source L-Phenylalanine 5 mM (C) -0.1 +0.0 -0.2 -4.2 +0.2
nitrogen source L-Phenylalanine (N) +0.0 +0.1 -0.0 -4.1 -0.3
nitrogen source L-Phenylalanine (N) +0.2 -0.1 -0.2 -3.9 -0.2
carbon source ferulate (C); with MOPS -0.3 +0.1 +0.1 -2.9 -1.1
carbon source benzoic (C) -0.4 -0.1 -0.0 -3.4 -0.1
carbon source 4-Hydroxybenzoic Acid (C) -0.0 -0.0 +0.2 -3.5 -0.5
carbon source Vanillic Acid (C) -0.1 +0.0 -0.1 -3.0 -0.7
carbon source Vanillic Acid (C) -0.2 +0.1 -0.1 -3.3 -0.3
nitrogen source D-2-Aminobutyric (N) -0.2 -0.2 +0.4 -3.2 -0.5
carbon source 3-methyl-1-butanol (C) -2.9 +0.2 +0.4 -0.8 -0.4
carbon source Crotonic (C) +0.2 -0.4 +0.1 -2.1 -1.3
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.5 -0.1 -0.3 -3.1 +0.6
carbon source Vanillin (C) -0.2 +0.2 -0.3 -2.8 -0.3
carbon source L-Phenylalanine 5 mM (C) +0.3 +0.0 -0.4 -3.6 +0.4
carbon source Ferulic Acid (C) -0.0 +0.1 +0.0 -3.6 +0.3
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.3 +0.1 -0.3 -3.2 +0.2
carbon source ferulate (C); with MOPS -0.5 +0.1 +0.5 -2.8 -0.3
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.4 +0.1 -0.1 -3.1 +0.0
carbon source 3-methyl-1-butanol (C) -2.5 +0.2 +0.5 -0.8 -0.1
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.2 +0.0 +0.2 -3.3 +0.2
carbon source L-tyrosine 5 mM (C) -0.2 -0.0 +0.1 -2.7 +0.7
carbon source L-tyrosine 5 mM (C) +0.4 -0.1 -0.5 -2.0 +0.8
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