Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_3508 and PP_3509 are separated by 406 nucleotidesPP_3509 and PP_3510 overlap by 4 nucleotidesPP_3510 and PP_3511 are separated by 145 nucleotidesPP_3511 and PP_3512 are separated by 189 nucleotides PP_3508: PP_3508 - Protein CobW, at 3,980,634 to 3,981,701 _3508 PP_3509: PP_3509 - Glyoxalase family protein, at 3,982,108 to 3,982,485 _3509 PP_3510: PP_3510 - conserved protein of unknown function, at 3,982,482 to 3,982,841 _3510 PP_3511: PP_3511 - Branched-chain-amino-acid aminotransferase, at 3,982,987 to 3,984,006 _3511 PP_3512: PP_3512 - conserved membrane protein of unknown function, at 3,984,196 to 3,984,636 _3512
Group Condition PP_3508 PP_3509 PP_3510 PP_3511 PP_3512
carbon source 3-methyl-1-butanol 0.1 vol% (C) -3.2 -0.5 -0.8 -5.0 -0.6
pH Growth at pH9 and (C) Trisodium citrate -3.1 -0.6 +0.0 -5.3 -0.4
temperature shift Temperature shift 10_to_25; with MOPS -2.2 -0.0 -0.0 -7.0 -0.2
carbon source L-Lysine (C) -1.7 -0.2 +0.2 -7.2 -0.4
carbon source 4-Methyl-2-oxopentanoic (C) -1.5 +0.3 -0.1 -7.5 -0.3
carbon source Hydroxy-L-Proline (C) -1.5 +0.2 -0.2 -7.1 -0.4
nitrogen source Ethanolamine (N) -3.5 +0.1 -0.0 -5.7 +0.3
nitrogen source Hippuric (N) -2.1 +0.0 -0.0 -6.4 -0.1
carbon source Beta-alanine (C) -1.0 +0.0 +0.1 -7.4 -0.3
carbon source D-Glucose (C) -0.6 -0.5 -0.0 -7.3 -0.2
temperature shift Temperature shift 30_to_25; with MOPS -0.9 -0.1 -0.4 -6.8 -0.3
nitrogen source D-Lysine (N) -1.1 +0.0 -0.1 -6.8 -0.5
carbon source Phenylacetic (C) -1.2 +0.2 -0.1 -7.4 +0.0
carbon source L-Valine (C) -0.7 -0.5 -0.5 -6.6 -0.1
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -1.3 -0.2 +0.1 -7.0 +0.1
pH Growth at pH6 and (C) Trisodium citrate -1.0 +0.0 -0.4 -6.6 -0.4
nitrogen source L-Ornithine (N) -1.0 +0.1 -0.0 -7.4 -0.0
carbon source 1,4-Butanediol (C) -1.2 -0.0 +0.2 -7.0 -0.2
carbon source Vanillic Acid (C) -1.9 +0.4 -0.1 -6.5 -0.2
carbon source 4-Hydroxybenzoic Acid (C) -1.0 +0.3 -0.1 -7.2 -0.3
carbon source 4-Methyl-2-oxopentanoic (C) -1.3 -0.2 -0.3 -6.4 -0.1
carbon source 1,4-Butanediol (C) -1.2 -0.1 +0.1 -7.1 +0.2
carbon source 4-Hydroxybenzoic Acid (C) -1.7 +0.4 -0.1 -6.6 +0.1
carbon source L-Leucine (C) -2.9 +0.2 -0.2 -4.7 -0.3
nitrogen source Ethanolamine (N) -3.4 +0.0 -0.1 -4.6 +0.2
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -1.4 +0.2 -0.1 -6.6 +0.1
nitrogen source nitrogen source Ammonium chloride 20mM -0.2 +0.2 -0.0 -7.7 +0.2
carbon source benzoic (C) -0.0 +0.6 +0.1 -8.0 -0.1
carbon source Hydroxy-L-Proline (C) -1.3 +0.3 -0.2 -6.4 +0.2
nitrogen source Propandiamine (N) -1.3 -0.9 +0.0 -5.6 +0.7
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