Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PP_3104	PP_3105	PP_3106	PP_5575	PP_3107
carbon source	Myristic (C)	+0.1	-4.1	+0.2	-4.2	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6	-5.7	-0.2	-1.1	-0.1
r2a control with 0.2% methanol	R2A control with 0.2% methanol	+0.1	-2.4	-0.0	-5.1	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	-4.9	-0.0	-2.3	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.3	-5.2	+0.0	-1.8	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6	-5.3	+0.0	-1.3	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5	-5.4	-0.2	-0.7	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5	-5.7	-0.2	-0.2	-0.3
carbon source	D-Fructose (C)	-0.2	-5.7	+0.0	-0.8	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.8	-4.9	+0.2	-1.1	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.8	-4.8	-0.4	-0.7	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.8	-5.2	-0.0	-0.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.5	-5.6	+0.0	-0.1	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6	-5.4	+0.2	-0.1	-0.3
nitrogen source	nitrate (N)	+0.1	-6.6	+0.1	+0.3	+0.1
carbon source	Crotonic (C)	-0.4	-4.4	-0.0	-0.2	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.1	-5.4	-0.1	-0.1	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.2	-5.2	-0.1	+0.0	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7	-4.7	+0.3	+0.0	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.1	-0.5	-0.2	-4.5	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	-5.9	+0.1	+0.7	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5	-4.5	-0.1	-0.6	+0.2
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	-0.1	-5.7	+0.1	+0.3	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.4	-5.6	+0.0	+1.0	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7	-4.7	+0.0	+0.3	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6	-4.7	+0.3	+0.3	-0.3
mixed community control	Putida_ML5X alone	-0.4	-4.9	-0.0	+0.3	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4	-5.5	+0.1	+1.1	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.6	-4.5	+0.4	+1.2	-0.2
phage	P. putida Sci Big MOI 0.1	+0.4	-3.6	+0.6	+0.4	+0.4