Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3103	PP_5574	PP_3104	PP_3105	PP_3106
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	-0.5	-0.6	-5.7	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	-0.6	-0.5	-5.4	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.2	-0.2	-0.5	-5.6	+0.0
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	-0.2	-0.5	-0.1	-5.7	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	-0.1	-0.2	-5.9	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3	-0.5	-0.8	-5.2	-0.0
carbon source	D-Fructose (C)	-0.1	-0.2	-0.2	-5.7	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	-0.2	-0.6	-5.4	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	+0.2	-0.5	-5.7	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.3	-0.4	-0.6	-5.3	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	-0.5	-0.1	-5.4	-0.1
nitrogen source	nitrate (N)	+0.2	+0.3	+0.1	-6.6	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	-0.3	-0.4	-5.5	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.2	-0.1	-0.4	-5.6	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	-0.4	-0.8	-4.9	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.1	-0.3	-0.2	-5.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.0	-0.2	-0.3	-5.2	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.2	+0.6	-0.8	-4.8	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	-0.4	-0.6	-4.7	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	-0.7	+0.0	-4.9	-0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	-0.1	-0.7	-4.7	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	+0.3	-0.7	-4.7	+0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.1	-0.5	-4.5	-0.1
mixed community control	Putida_ML5X alone	-0.0	+0.2	-0.4	-4.9	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	+0.1	-0.6	-4.5	+0.4
carbon source	Crotonic (C)	+0.4	-0.0	-0.4	-4.4	-0.0
stress	MOPS minimal media_Glucose20mM with Lithium chloride 200 mM	+0.3	-0.4	-0.3	-3.6	+0.1
carbon source	Myristic (C)	+0.0	+0.6	+0.1	-4.1	+0.2
nitrogen source	2,6-diaminopimelic (N)	+0.2	+0.1	+0.6	-3.7	+0.1
phage	P. putida Sci Big MOI 0.1	+0.6	+0.6	+0.4	-3.6	+0.6