Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PP_2656	PP_2657	PP_2658	PP_2659	PP_2660
nitrogen source	Propandiamine (N)	-1.1	-1.1	-0.4	-1.0	+0.3
pH	Growth at pH6 and (C) D-Glucose	-0.2	+0.2	-0.8	-1.6	-0.7
stress	R2A with Fusaric 480 ug/mL	-0.2	-0.2	-1.2	-0.4	-0.1
nitrogen source	Propandiamine (N)	-0.6	-0.7	-0.1	-0.8	+0.1
stress	Growth with Chloride 500 mM; with MOPS	-0.2	-0.5	-0.8	-0.5	+0.0
pH	LB 0.1x with 55.5 mM D-Glucose; pH 4.6	-0.1	-0.1	-0.4	-0.2	-1.1
nitrogen source	Ammonium chloride (N)	+0.0	-0.2	-1.1	-0.6	+0.1
carbon source	D-Glucose (C)	-0.1	-0.4	-0.3	-1.0	+0.1
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	-0.4	-0.4	-0.6	-0.4	+0.2
temperature shift	Temperature shift 30_to_21; with MOPS	+0.1	-0.1	-1.5	+0.3	-0.0
micoeukaryotes	Dictyostellum sp.mixed culture-1	+0.2	+0.0	+0.1	+0.2	-1.1
nitrogen source	2,6-diaminopimelic (N)	+0.3	+0.4	-0.8	-0.4	+0.2
micoeukaryotes	C.elegans, mixed culture-1	+0.2	+0.3	+0.4	+0.4	-1.6
micoeukaryotes	Dictyostellum sp.mixed culture-2	+0.3	+0.3	+0.4	+0.1	-1.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4	+0.4	-1.2	+0.3	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6	-0.0	+0.7	-0.3	+0.4
pH	pH 5	+0.5	+0.3	-0.4	+0.3	-0.3
micoeukaryotes	C.elegans, mixed culture-2	+0.4	+0.7	+0.2	+0.7	-1.4
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.5	+0.6	+0.8	+0.4	-1.7
pH	Growth at pH7 and (C) D-Glucose	-0.2	+0.3	+0.8	+0.4	+0.1
phage	P. putida Sci small MOI 0.1	-0.1	+0.0	+0.9	+0.6	+0.2
phage	P. putida Sci Big MOI 0.1	+0.3	+0.7	+0.1	+0.7	-0.2
pH	pH 8	+0.6	+0.3	+0.4	+0.4	-0.3
carbon source	3-methyl-1-butanol 0.25 vol% (C)	+0.6	+0.5	-0.4	+0.4	+0.5
carbon source	Myristic (C)	+0.2	+0.4	+0.6	+0.5	+0.1
carbon source	3-methyl-3-buten-1-ol 0.1 vol% (C)	+0.6	+0.4	+0.1	+0.5	+0.4
nitrogen source	D-2-Aminobutyric (N)	-0.0	+0.4	+0.9	+0.4	+0.5
phage	P. putida Missley MOI 0.1	+0.3	+0.5	+1.0	-0.1	+0.7
phage	PUT 8 MOI 1	+0.5	+0.2	+0.4	+0.5	+0.6
phage	P. putida Sci small MOI 0.1	+0.7	+0.3	+1.8	-0.1	+0.5