Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2547	PP_2548	PP_2549	PP_2550	PP_2551
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM	+0.2	+0.1	+0.1	-3.1	-2.9
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM	-0.4	+0.1	+0.4	-2.4	-2.9
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.9	-0.3	-0.4	-1.7	-0.4
carbon source	ferulate (C); with MOPS	-0.0	-0.0	-0.5	-1.9	-0.3
stress	R2A with Fusaric 240 ug/mL	-0.5	-0.2	-0.6	-1.5	+0.1
pH	Growth at pH6 and (C) D-Glucose	-2.7	+0.3	+0.4	-0.4	-0.1
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-1.1	-0.1	-0.0	-0.6	-0.5
phage	P. putida PUT 7 MOI 1	-1.5	+0.2	-0.2	-0.8	-0.0
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.2	-0.4	-0.2	-1.4	-0.1
stress	Growth with Chloride 200 mM	+0.3	-0.4	+0.1	-1.6	-0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	-0.6	-0.1	-1.1	+0.4
carbon source	carbon source D-Glucose 55.5 mM	+0.0	-0.0	+0.8	-2.9	+0.4
phage	P. putida Sci small MOI 0.1	+0.1	+0.5	-0.8	-0.5	-1.0
nitrogen source	nitrate (N)	-1.1	-0.3	-0.1	+0.4	-0.6
temperature shift	Temperature shift 30_to_25; with MOPS	-0.7	-0.1	-0.2	-1.0	+0.5
nitrogen source	D-2-Aminobutyric (N)	+0.7	-0.3	-0.1	-1.4	-0.1
nitrogen source	D-2-Aminobutyric (N)	-1.0	-0.7	+0.4	+0.5	-0.2
carbon source	Valeric (C)	+0.8	+0.0	+0.2	-0.4	-1.0
phage	P. putida Sci small MOI 0.1	-1.1	+0.4	+0.7	-0.1	-0.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.1	+0.3	-0.4	+0.8	-0.9
carbon source	carbon source Bisabolene 48.9 mM	+0.6	-0.2	+0.4	-1.2	+0.4
temperature	Growth at 25C	-0.9	+0.2	+0.3	+0.4	+0.7
carbon source	4-Aminobutyric 10 mM (C)	+0.3	+0.3	+0.5	+1.0	-0.6
pH	pH 8	+1.1	+0.0	+0.7	+0.2	+0.4
carbon source	Tween 20 (C)	+0.3	+0.4	+0.5	+0.9	+0.4
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	+0.4	-0.2	+1.0	+0.3	+1.2
carbon source	carbon source 3-O-methyl-glucose 50 mM	+0.7	-0.1	+0.8	+1.1	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.7	+0.5	-0.4	+2.1	-0.2
pH	pH 9	+0.6	-0.2	+1.1	+0.5	+1.0
pH	pH 6	+0.8	+0.1	+0.8	+1.0	+0.8