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Protein
Homologs
Fitness for 5 genes in
Pseudomonas putida KT2440
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500 nt
PP_2373 and PP_2374 are separated by 313 nucleotides
PP_2374 and PP_2375 are separated by 142 nucleotides
PP_2375 and PP_2376 are separated by 182 nucleotides
PP_2376 and PP_2377 are separated by 194 nucleotides
PP_2373: PP_2373 - conserved protein of unknown function, at 2,710,542 to 2,710,697
_2373
PP_2374: PP_2374 - conserved protein of unknown function, at 2,711,011 to 2,711,253
_2374
PP_2375: PP_2375 - cobalamin-dependent methionine synthase, at 2,711,396 to 2,715,103
_2375
PP_2376: PP_2376 - Esterified fatty acid cis/trans isomerase, at 2,715,286 to 2,717,586
_2376
PP_2377: PP_2377 - putative acetyltransferase Act, at 2,717,781 to 2,718,815
_2377
Group
Condition
PP
_2373
PP
_2374
PP
_2375
PP
_2376
PP
_2377
carbon source
1,4-Butanediol (C)
-0.5
N.D.
-4.0
+0.1
-0.1
pH
Growth at pH6 and (C) D-Glucose
-1.4
N.D.
-2.1
-0.1
-0.1
carbon source
Delta-Dodecalactone (C)
-0.9
N.D.
-2.7
+0.0
+0.1
carbon source
butyrate (C)
-0.5
N.D.
-2.7
-0.1
-0.1
pH
Growth at pH7 and (C) Trisodium citrate
-0.5
N.D.
-2.4
-0.1
-0.4
nitrogen source
Ammonium chloride (N)
-1.3
N.D.
-1.8
+0.2
-0.3
carbon source
Delta-Dodecalactone (C)
-0.3
N.D.
-2.9
-0.1
+0.1
carbon source
acetate (C)
-0.4
N.D.
-3.0
-0.0
+0.2
carbon source
4-Methyl-2-oxopentanoic (C)
-0.3
N.D.
-2.8
-0.0
-0.0
carbon source
Delta-Undecalactone (C)
-0.7
N.D.
-2.5
+0.1
+0.1
carbon source
4-Methyl-2-oxopentanoic (C)
-0.0
N.D.
-3.2
-0.0
+0.1
pH
Growth at pH6 and (C) Trisodium citrate
-0.2
N.D.
-2.7
-0.0
-0.1
carbon source
1,4-Butanediol (C)
-0.3
N.D.
-2.7
+0.0
+0.1
nitrogen source
nitrate (N)
-0.9
N.D.
-1.6
-0.2
-0.2
temperature
Growth at 34C
-0.8
N.D.
-2.0
+0.1
-0.1
pH
Growth at pH6 and (C) Trisodium citrate
-0.5
N.D.
-2.2
+0.1
-0.2
carbon source
propionate (C)
-0.8
N.D.
-2.0
+0.0
+0.0
pH
Growth at pH6 and (C) Trisodium citrate
+0.4
N.D.
-3.2
+0.2
-0.2
nitrogen source
nitrite (N)
-0.9
N.D.
-1.8
+0.1
-0.1
pH
Growth at pH6 and (C) Trisodium citrate
-0.4
N.D.
-2.3
+0.1
-0.1
carbon source
Trisodium citrate (C)
-2.1
N.D.
-0.8
+0.1
+0.2
pH
Growth at pH9 and (C) D-Glucose
-0.9
N.D.
-1.7
+0.1
-0.1
nitrogen source
Urea (N)
-0.9
N.D.
-1.6
+0.3
-0.3
temperature shift
Temperature shift 10_to_34
-0.1
N.D.
-2.5
+0.2
-0.0
pH
Growth at pH6 and (C) Trisodium citrate
+0.4
N.D.
-2.8
+0.1
-0.2
temperature shift
Temperature shift 10_to_34
+0.1
N.D.
-2.6
+0.2
-0.1
temperature shift
Temperature shift 10_to_34
+0.5
N.D.
-2.8
+0.2
+0.1
pH
Growth at pH7 and (C) Trisodium citrate
+0.5
N.D.
-2.2
+0.1
-0.2
temperature shift
Temperature shift 30_to_25
+0.8
N.D.
-2.3
-0.0
+0.0
pH
Growth at pH7 and (C) D-Glucose
+1.2
N.D.
-1.2
-0.4
+0.1
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