Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_5520 and PP_t41 are separated by 259 nucleotidesPP_t41 and PP_2354 are separated by 117 nucleotidesPP_2354 and PP_2355 are separated by 13 nucleotidesPP_2355 and PP_2356 are separated by 15 nucleotides PP_5520: PP_5520 - conserved protein of unknown function, at 2,684,640 to 2,684,882 _5520 PP_t41: PP_t41 - tRNA-Gln, at 2,685,142 to 2,685,216 _t41 PP_2354: PP_2354 - Sensory box histidine kinase/response regulator, at 2,685,334 to 2,687,721 _2354 PP_2355: PP_2355 - Response regulator receiver protein, at 2,687,735 to 2,688,196 _2355 PP_2356: PP_2356 - putative Phytochrome family protein, at 2,688,212 to 2,690,479 _2356
Group Condition PP_5520 PP_t41 PP_2354 PP_2355 PP_2356
carbon source ferulate (C); with MOPS -0.1 N.D. -3.8 -0.9 -3.3
carbon source ferulate (C); with MOPS +0.2 N.D. -3.1 -0.9 -3.8
carbon source ferulate (C); with MOPS +0.0 N.D. -2.9 -1.1 -3.1
carbon source 2-Methylbutanoic (C) -0.2 N.D. -3.2 -0.6 -3.1
carbon source 2-Methylbutanoic (C) -0.0 N.D. -2.8 +0.1 -3.5
carbon source Phenylacetic (C) -0.2 N.D. -2.0 -0.6 -2.9
carbon source Delta-Nonalactone (C) +0.1 N.D. -3.3 +0.5 -2.7
carbon source Delta-Decalactone (C) +0.2 N.D. -1.8 -0.6 -2.7
carbon source Ferulic Acid (C) +0.3 N.D. -2.3 -0.4 -2.5
carbon source Delta-Decalactone (C) -0.1 N.D. -1.8 -0.1 -2.9
carbon source Hexanoic (C) -0.2 N.D. -2.2 +0.4 -2.8
carbon source butyrate (C) -0.3 N.D. -2.3 +0.5 -2.6
carbon source Vanillin (C) +0.0 N.D. -1.9 -0.6 -2.2
carbon source p-Coumaric (C) +0.1 N.D. -2.2 -0.1 -2.4
carbon source Phenylacetic (C) -0.3 N.D. -1.5 -0.2 -2.6
carbon source Valeric (C) -0.2 N.D. -1.8 -0.1 -2.5
carbon source butyrate (C) +0.0 N.D. -2.1 +0.1 -2.3
carbon source Ferulic Acid (C) +0.3 N.D. -1.5 -0.6 -2.2
carbon source benzoic (C) -0.3 N.D. -1.9 -0.1 -1.7
carbon source Ferulic Acid (C) -0.0 N.D. -1.5 -0.4 -2.1
stress 6-methoxy-2(3H)-benzoxazolone 2.5 mM -0.0 N.D. -1.4 -0.3 -2.1
carbon source Vanillin (C) +0.2 N.D. -1.7 -0.2 -2.1
carbon source Decanoic (C) -0.0 N.D. -1.5 +0.1 -2.3
carbon source Valeric (C) -0.1 N.D. -1.5 +0.3 -2.3
carbon source Nonanoic (C) +0.0 N.D. -1.5 +0.1 -2.4
carbon source Octanoic (C) +0.3 N.D. -1.4 -0.2 -2.4
carbon source p-Coumaric (C) +0.2 N.D. -1.5 -0.4 -1.9
carbon source Decanoic (C) +0.0 N.D. -1.4 +0.2 -2.3
carbon source Delta-Dodecalactone (C) +0.4 N.D. -1.8 +0.2 -2.1
stress 3-methyl-3-butenol (pure) 0.25 vol% -0.2 N.D. -1.6 +0.3 -1.8
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