Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_2331 and PP_2332 are separated by 5 nucleotidesPP_2332 and PP_2333 are separated by 306 nucleotidesPP_2333 and PP_2334 overlap by 4 nucleotidesPP_2334 and PP_2335 are separated by 60 nucleotides PP_2331: PP_2331 - conserved membrane protein of unknown function, at 2,658,800 to 2,660,335 _2331 PP_2332: PP_2332 - conserved exported protein of unknown function, at 2,660,341 to 2,660,877 _2332 PP_2333: PP_2333 - GntR family transcriptional regulator, at 2,661,184 to 2,661,900 _2333 PP_2334: PP_2334 - 2-methylisocitrate lyase, at 2,661,897 to 2,662,787 _2334 PP_2335: PP_2335 - methylcitrate synthase, at 2,662,848 to 2,663,975 _2335
Group Condition PP_2331 PP_2332 PP_2333 PP_2334 PP_2335
carbon source Levulinic Acid (C) +0.1 -0.0 -3.9 -5.7 -6.3
carbon source Levulinic Acid (C) +0.4 +0.2 -4.4 -5.5 -6.1
carbon source Levulinic Acid (C) +0.2 +0.0 -4.6 -5.3 -5.2
carbon source propionate (C) +0.0 -0.5 -3.2 -5.5 -5.0
carbon source Levulinic Acid (C) +0.3 -0.1 -5.1 -4.4 -4.5
carbon source DL-3-Hydroxyisobutyric (C) +0.1 +0.2 -1.8 -5.3 -6.5
carbon source L-Isoleucine (C) +0.2 -0.0 -0.8 -6.6 -5.9
carbon source Delta-Undecalactone (C) +0.4 +0.2 -0.6 -5.5 -7.5
carbon source 2-Methylbutanoic (C) +0.7 +0.3 -3.3 -4.2 -6.4
carbon source 2-Methylbutanoic (C) +0.8 +0.3 -2.6 -4.8 -6.2
carbon source DL-3-Hydroxyisobutyric (C) +0.3 +0.2 -1.0 -5.4 -6.4
carbon source L-Isoleucine (C) +0.1 +0.1 -1.1 -5.2 -5.6
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -0.1 +0.1 -0.9 -5.3 -5.6
carbon source rac-3-Hydroxypentanoic Acid (C) +0.3 +0.5 -1.0 -5.5 -5.9
carbon source L-Valine (C) +0.3 +0.3 -0.8 -4.5 -6.1
carbon source 3-hydroxypentanoate +0.5 +0.2 -0.9 -4.4 -6.3
carbon source 2-methyl-1-butanol (C) -0.1 -0.2 -0.7 -4.4 -5.4
carbon source L-Valine (C) +0.1 +0.4 -0.6 -5.1 -5.6
carbon source rac-3-Hydroxypentanoic Acid (C) +0.2 +0.3 -1.0 -4.9 -5.4
carbon source 1-Pentanol (C) -0.1 +0.0 -1.0 -4.1 -5.0
carbon source Heptanoic (C) +0.3 -0.1 -0.9 -5.6 -3.8
carbon source Delta-Undecalactone (C) +1.3 +0.8 -0.7 -4.5 -6.9
carbon source L-Valine (C) -0.1 +0.2 -0.6 -4.3 -5.0
carbon source Heptanoic (C) +0.3 -0.1 -0.9 -3.5 -5.6
carbon source Valeric (C) +0.3 +0.2 -0.6 -3.7 -5.5
carbon source 4-Hydroxyvalerate (C) (40mM) -0.0 -0.0 -0.8 -3.4 -4.9
carbon source Valeric (C) +0.2 +0.1 -0.4 -5.0 -3.6
carbon source 4-Hydroxyvalerate (C) (40mM) -0.1 +0.3 -0.6 -3.9 -4.4
carbon source 3-Methyl-2-Oxobutanoic Acid (C) +0.3 +0.4 -0.8 -3.9 -4.5
carbon source Delta-Nonalactone (C) +1.7 +0.9 -0.8 -4.8 -5.0
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